Pairwise Alignments

Query, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

Subject, 407 a.a., carbamoyl-phosphate synthase small subunit from Bifidobacterium breve UCC2003

 Score =  252 bits (644), Expect = 1e-71
 Identities = 163/406 (40%), Positives = 215/406 (52%), Gaps = 37/406 (9%)

Query: 11  KPTAMLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIG 70
           K  A+LVL DG V  G   GA G+   E+ F T +TGY+E LTDPSY  QIV  TFPHIG
Sbjct: 16  KDDAVLVLEDGQVYVGEPYGALGETTGEIVFATGMTGYQETLTDPSYDRQIVVQTFPHIG 75

Query: 71  NVGTNEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRA 130
           + G N ED E    ++R    G I +    + SN+RA   LD  L   G++GL  IDTR 
Sbjct: 76  DTGVNSEDPE----SSRIWVAGYIVRDPSPNVSNWRAEGSLDDDLVKNGIVGLSHIDTRK 131

Query: 131 LTAWIRENG-------APNAVIAHDPNGVFDIEALKAEAKAWSGLVGLDLAIEATSGQSS 183
           L   +R  G       +  A++      +  IE L  + K    + GL L  E ++ +  
Sbjct: 132 LVRHLRSAGVMRAGIFSGEALVDAATGKLKTIEQLLEDVKNTPPMQGLSLYDEVSTKE-- 189

Query: 184 TWTETPWVWNKGYGTLGEADAK---YHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAE 240
           T+T  P          GE + K   Y V  VD G+K       A   C+V VVP+  +  
Sbjct: 190 TYTIEP---------CGEYEGKEPLYTVAAVDLGIKGMTPHRMAERGCRVHVVPSTITFA 240

Query: 241 DILALKPDGVFLSNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEK 300
           ++ AL PDGVF SNGPGDP   G   + +++ ++ +  P FGIC G+Q+LG A+G  T K
Sbjct: 241 ELEALNPDGVFFSNGPGDPEQAGP-EIELLRQVLDAGYPFFGICFGNQLLGRALGFGTYK 299

Query: 301 MHQGHHGANHPVKDFTTGKVEIVSMNHGFAVDT---KSLPEGVEE--------THTSLFD 349
           +  GH G N PVKD TTGKVE+ + NHGFAVD    K +    E         +H  L D
Sbjct: 300 LKFGHRGINQPVKDLTTGKVEVTAHNHGFAVDAPIGKQVDAPFENGKYGKVFVSHIDLND 359

Query: 350 GTNCGLRIVGKPVFSVQHHPEASPGPQDSHYLFRRFVNLLRENKGE 395
               GL+ V  P FSVQ+HPEA+ GP D+ YLF RF  L++ N  E
Sbjct: 360 DVVEGLQCVDIPAFSVQYHPEAAAGPHDAAYLFDRFCELMKNNPKE 405