Pairwise Alignments

Query, 850 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

Subject, 744 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  281 bits (720), Expect = 8e-80
 Identities = 183/542 (33%), Positives = 289/542 (53%), Gaps = 25/542 (4%)

Query: 10  LTNCDREPIHIPGYIQPHGCLIACDNAMRMVLRHSENCGELLGLEGD-LNGRTAEDVLGK 68
           L NC  EPI  PG IQPHG L+       ++ + S N  +L+  +   L G+T + +LG 
Sbjct: 13  LANCADEPIRFPGTIQPHGVLLMLSEPDFVIRQVSANVLQLMAQDPHRLLGQTLDALLGL 72

Query: 69  KLVHDLRNALTVTGRTTRPAMLPAMETSDGRSFDISLHRYKSTTIIEFEPSGSDAQPLGT 128
           +    +  A      +     +P     + + FD  +HR++   I+E E   SD +P G 
Sbjct: 73  EQAEAILIACRAAPESDN---VPVAIVVNQQRFDALVHRHQGALIVELEQHLSDYRPEGV 129

Query: 129 AR-----KMVDRIREADSVESLISRTTRLVKATLGYDRVMIYRFQEDGAGKVVSEAKQPE 183
           +      +M+ R++ A ++++L   + R ++A  GYDRV+IYRF+E+G G+V++EA  P 
Sbjct: 130 SGEANMGRMLQRLQSAKTLQALYEISVREIQAMTGYDRVLIYRFEEEGHGQVIAEASAPS 189

Query: 184 LESFLGQYFPASDIPQQARALYLKNTLRIISDASGTRIPVLPAVDVSGE-PLDLSYAHLR 242
           +E + G +FPASDIP+QAR LY  N LRII +A  T +P++P +    + PLDLS+A LR
Sbjct: 190 MELYKGLFFPASDIPEQARELYRINWLRIIPNADYTPVPLVPQLRPDTQAPLDLSFATLR 249

Query: 243 SVSPIHCEYLRNMGVAASMSISVIVDGALWGLIACHHYSPRVLSMPVRIAAEMFGEFFSM 302
           SVSPIH +Y++NMGV +SMSIS++    LWGLI+C +  P ++   +R+A +  G+  S+
Sbjct: 250 SVSPIHRQYMKNMGVLSSMSISLMEGERLWGLISCGNRQPLLVPHEMRMACQTIGQVLSL 309

Query: 303 HLQVLKQKRRLDTINHAHAALDRFLRLAAHHANIEELLVDSF----QDFADLMPCDGVGL 358
            +  +   + L+      A L+    LAA  A   + + D      Q   +L    GV +
Sbjct: 310 QISAM---QALELTRQRDAKLEDLKVLAAVMAESSDNVFDGLSQEPQRLMELTGASGVAI 366

Query: 359 WVGNNWHGHGATPPHDAIPRLARFVASASEGRVWATHALSQAIPEAEIYAGTAAGMLAIP 418
              N  H HG  P  + I  L +++    +  V++ H LS   P A+ Y   A+G+LAI 
Sbjct: 367 LEDNKLHRHGQCPEPEQIRELHKWILETGK-PVFSHHNLSSVFPAAQAYQDVASGVLAIH 425

Query: 419 LSQVKSDYLLFFRKEIVQNLNWAGNPEK--SYETGPMGDRLTPRKSFAIWKETVRLQAQP 476
           L +   + +L+FR E+ Q L W+G+P+K    E    G RL PR SF IWK  +   +  
Sbjct: 426 LPKPVENGVLWFRPEVKQTLQWSGDPQKPLDLENSETGLRLRPRTSFEIWKVEMAGISTK 485

Query: 477 WSEADREIAEAARIALVEVAFHHSELMAGERERAEVRQR-MLNEELNHRVKNVLAIIKSL 535
           WS  D   A   R + +E    +       +ER  V+ R  L   ++H +++ + +I  L
Sbjct: 486 WSHGDLFAANDLRRSALE----NDLARQVHKERLAVQARDELVAVVSHDLRSPMTVISML 541

Query: 536 VG 537
            G
Sbjct: 542 CG 543