Pairwise Alignments

Query, 850 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

Subject, 612 a.a., PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  173 bits (439), Expect = 2e-47
 Identities = 118/350 (33%), Positives = 182/350 (52%), Gaps = 19/350 (5%)

Query: 507 RERAEVRQRMLNEELNHRVKNVLAIIKSLVGNPSQEGKTLQEYVTALKGRIQALSFAHDQ 566
           R+  E ++  L  EL+HR+KN+LA+++S+    +++  +L  ++     R++++S AHD 
Sbjct: 269 RKLQEAQRESLVAELDHRIKNLLAVVQSVAAQSARKSASLDVFLKTFAARLKSMSSAHDL 328

Query: 567 IIRGEGGGA-LRDLLEAELSPHRSPETTVKLEGPQITLDSRAFSVMALVLHELATNAAKY 625
           +      GA L  +  AEL      +T  + +GP++ L  RA + ++L LHELA NA +Y
Sbjct: 329 LSAARWRGATLARIAAAELGGLAPTQT--RWDGPELFLTPRAAAALSLALHELAVNAVRY 386

Query: 626 GALSQNGGQLHVRWDVNENRDCEISWRETLLTTLPAPSRAGFGTALISRSIPYDLGGRST 685
           G+LS   G++ V W         + W ET      AP+  GFG  LI      +LGG + 
Sbjct: 387 GSLSTENGKVEVVWRRTPEGGFALEWLETGGPPAVAPATKGFGATLIEDVAGRELGGAAK 446

Query: 686 IRYLPNGLEAEI------LLPFRHVSSVSAA----FETKTEAETLPQPRRYNREEPLKVL 735
           I Y P G+ A I      L     +  VSAA     ET   A+   +P        LKVL
Sbjct: 447 ISYRPGGVTAMIQGAPDALADAPPIEPVSAAPERIVETVVAADETVRP---GAIAGLKVL 503

Query: 736 LVEDQMLIAMDVENMLEDNGIKAIETATSSAMAIEKLKTYLPDVAILDINLGSDTSIPVA 795
           +VED +L+A+++E  LED G++ +  A     A+  ++    DVA+LD +L   +  PVA
Sbjct: 504 IVEDSLLLALELEAGLEDAGVEVVGCAAELGEALSMVELDF-DVAVLDADLNGQSVAPVA 562

Query: 796 RELHRRGIPFLFATGYADGSMVPDEFGAVPVIRKPYDEDALMAGIGVLVG 845
             L   G PF+FATGYAD    P  F A P++RKPY+   +   +  + G
Sbjct: 563 EILRSIGRPFVFATGYAD-KAAPMGFDA-PIVRKPYNVHQIARAVAGVTG 610