Pairwise Alignments

Query, 1257 a.a., methionine synthase from Agrobacterium fabrum C58

Subject, 1244 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1471 bits (3807), Expect = 0.0
 Identities = 754/1236 (61%), Positives = 922/1236 (74%), Gaps = 18/1236 (1%)

Query: 22   LRDAASERILILDGAMGTQIQGLGFDEDHFRGDRFIGCACHQKGNNDLLILTQPDAIEEI 81
            +R+  S RILILDGAMGT IQG   +E  +RG+RF       KGNNDLL+LTQP  I++I
Sbjct: 15   IRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNNDLLVLTQPHIIKQI 74

Query: 82   HYRYAMAGADILETNTFSSTRIAQADYEMENAVYDLNREGAAIVRRAAQRAEREDGRRRF 141
            H  Y +AGADI+ETNTF++T IA ADY+M++   ++NREGA + R A    E+  G+ R+
Sbjct: 75   HTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLAREACDAIEQATGKPRY 134

Query: 142  VAGAIGPTNRTASISPDVNNPGYRAVSFDDLRIAYGEQIDGLIDGGADIILIETIFDTLN 201
            VAG +GPTNRT SISPDVN+PG+R + FD+L  AY E    LI+GGADII++ETIFDTLN
Sbjct: 135  VAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVETIFDTLN 194

Query: 202  AKAAIFACEERFEA-----KGIRLPVMISGTITDLSGRTLSGQTPSAFWNSVRHANPFTI 256
            AKAA+FA E  F+         RLPVMISGTITD SGRTL+GQT  AF+NS+RH  P +I
Sbjct: 195  AKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLRHIKPLSI 254

Query: 257  GLNCALGADAMRPHLQELSDVADTFVCAYPNAGLPNEFGQYDETPEMMARQVEGFVRDGL 316
            GLNCALG   +RP+++ELS +A+ +V A+PNAGLPNEFG YDETPE MA+ ++ + R+G+
Sbjct: 255  GLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEDMAKVIQEWAREGM 314

Query: 317  VNIVGGCCGSTPEHIRAIAEAVKDYKPREIPEHKPFMSLSGLEPFVLTKDIPFVNVGERT 376
            +NI+GGCCGSTPEHI+ I EAV+ + PR +PE      L+GLEP  +     FVNVGERT
Sbjct: 315  LNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLTIDAQTLFVNVGERT 374

Query: 377  NVTGSARFRKLITAGDYTAALAVARDQVENGAQIIDINMDEGLIDSEKAMVEFLNLIAAE 436
            NVTGSA+F KLI  G +  AL VAR+QVE+GAQIIDINMDEG++D  + M +FLNLIA+E
Sbjct: 375  NVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDGVEIMHKFLNLIASE 434

Query: 437  PDIARVPVMIDSSKFEIIEAGLKCVQGKSIVNSISLKEGEEKFLQQARLVHNYGAAVVVM 496
            PDI+RVP+MIDSSK+E+IEAGLKC+QGK IVNSISLKEGEEKF++QA LV  YGAA ++M
Sbjct: 435  PDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQATLVKRYGAAAIIM 494

Query: 497  AFDEVGQADTYQRKVEICARAYKLLTEKAGLSPEDIIFDPNVFAVATGIEEHNNYGVDFI 556
            AFDE GQADT  RKVEIC RAY++L +K G  PEDIIFDPN+FA+ATGI+EH+NY VDFI
Sbjct: 495  AFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHDNYAVDFI 554

Query: 557  EATKTIRETMPLTHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQVGMDMGIVNAGQLA 616
            +A K I+ T+P   ISGGVSN+SFSFRGN PVREA+HAVFLYHAI+VGMDMGIVNAGQLA
Sbjct: 555  DAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIKVGMDMGIVNAGQLA 614

Query: 617  VYDNIDAELREACEDVVLN-----RRDDATERLLEVAERFRGTGEKQAKVQDLSWREYPV 671
            ++D+ID EL+   E+VVLN        + TE+LLE+AE+FRG G   AK +DL WR +PV
Sbjct: 615  IFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSSSAKKEDLEWRSWPV 674

Query: 672  EKRLEHALVNGITDYIEADTEEARQQAARPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVV 731
             +RL HALV GIT++I+ DTE ARQ A+RPL VIEGPLM GMN+VGDLFGSGKMFLPQVV
Sbjct: 675  NQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVGDLFGSGKMFLPQVV 734

Query: 732  KSARVMKQAVAVLLPYMEEEKRLNGGSERSAAGKVLMATVKGDVHDIGKNIVGVVLACNN 791
            KSARVMK+AVA L P++E+EK + G S     GK+LM TVK DVHDIGKNIVGVVLACN 
Sbjct: 735  KSARVMKKAVAYLNPFIEKEK-VAGQSN----GKILMVTVKSDVHDIGKNIVGVVLACNG 789

Query: 792  YEIIDLGVMVPTTKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMERQGFDIPLLIGG 851
            +E+ DLGVMV   +ILE      +D+IG+SGLITPSLDEMVH      R+G  IP +IGG
Sbjct: 790  FEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAIIGG 849

Query: 852  ATTSRVHTAVKIHPRYEQGQAIYVTDASRAVGVVSALLSEEQKPAYIDGIRAEYAKVAEA 911
            AT S++HTAVKI P Y  G AIY+ DASRAV +VS L++ E + A ID   AEY  +   
Sbjct: 850  ATCSKIHTAVKIAPHYPHG-AIYIADASRAVPMVSKLVNNETRQATIDETYAEYDDMRTK 908

Query: 912  HARNEREKQRLPLSRARENAHKIDWSSYSVVKPQFFGTKVFETYDLEELSRYIDWTPFFQ 971
                 + K+ + L  AREN  + DW++YS  KP   G +VF+ Y L +L   IDWTPFF+
Sbjct: 909  RLSQAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDRIDWTPFFR 968

Query: 972  TWELKGRFPAILEDEKQGEAARQLYADAQAMLAKIIEEKWFRPRAVIGFWPANAVG-DDI 1030
             WEL G +P IL D+  G  A++L++D +AML KIIEEKW   + VIG +PAN VG DDI
Sbjct: 969  AWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGFDDI 1028

Query: 1031 RLFTDEGRKEELATFFTLRQQLSKRDGRPNVALSDFVAPVDSGVADYVGGFVVTAGIEEV 1090
             L+TDE R E   T   LR QL +R G  N  L+DFVAP DSGVADY+GGF VTAG    
Sbjct: 1029 ELYTDETRTEVELTTHHLRMQL-ERVGNDNFCLADFVAPKDSGVADYMGGFAVTAGHGID 1087

Query: 1091 AIAERFERANDDYSSILVKALADRFAEAFAERMHERVRKEFWGYAPDEALAGDDLIGEAY 1150
                RFE  +DDY++I++K LADR AEAFAERMHERVRKEFWGYA DE L  + LI E Y
Sbjct: 1088 EHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEALIREKY 1147

Query: 1151 AGIRPAPGYPAQPDHTEKKTLFALLDATNAAGVELTESYAMWPGSSVSGLYIGHPESYYF 1210
             GIRPAPGYPA PDHTEK  L+ LL       + +TESYAM+P ++VSG Y  HP+S YF
Sbjct: 1148 KGIRPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSGWYFAHPKSRYF 1207

Query: 1211 GVAKVERDQVLDYARRKDMPVTEVERWLGPVLNYVP 1246
            GV+ + RDQV DYA+RK M V E E+WL PVL+Y P
Sbjct: 1208 GVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYDP 1243