Pairwise Alignments

Query, 294 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 25/253 (9%)

Query: 52  SFTLDNIAGLFTSSILAAYWISIKISLASAALGCLI--GFAVAAAVVLGGLP---QRIRG 106
           S  + ++A L  + + A  +I I +S +SAA       G+ +   V     P   Q +  
Sbjct: 2   SVWIRSLAILIAAFVAAPMFIVIPMSFSSAASLAFPPPGYTLQNYVNFFSDPNWTQPLTN 61

Query: 107 PLLTFSGVA--SQFAGVPLAFAFIATL---GPVGLLTVFLKTQIGIDLRLLGFNIL---- 157
            LL   G    +    VP +FA +  +     V  L + L   +   +  LG+ I     
Sbjct: 62  SLLIGFGTVCVTMLVAVPASFALVRHVFIGRTVFNLLIMLPMIVPTIVMALGYYIYFGQL 121

Query: 158 ----SFWGLTVTYLFFQIPLMILIITPALDGLKREWREAAEILGATGLQYWRMVAFPILL 213
               S+ G+ + +    +P+  LI+T AL G  R    AA  LGA+    +R++ FPIL 
Sbjct: 122 RLVQSYLGVILAHSCIALPMSTLILTAALKGFDRSVERAAMNLGASPFATFRLITFPILR 181

Query: 214 PSLLGTMSLLFANAFGAVATAIALTGSSLNIVPILLFAQIRGDVLGNPHLGYALAF-GMI 272
           P+        F  +F     A+ ++G     +P  +F  +R +   +P +  A +F  ++
Sbjct: 182 PAFTVAGLFAFIASFDEAVIALFISGRDKATLPRQMFNAVRQE--ADPTISAASSFLFLL 239

Query: 273 VLTGIANALYIWL 285
           VL G+     IWL
Sbjct: 240 VLAGVC----IWL 248



 Score = 25.4 bits (54), Expect = 0.002
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 20  WIGVVPFAVFVMLFLILPTMKIVIGAFQQTDGSFTLDNIAGLFTSSILAAYWISIKIS-- 77
           +IG   F + +ML +I+PT+ + +G +      F    +   +   ILA   I++ +S  
Sbjct: 89  FIGRTVFNLLIMLPMIVPTIVMALGYYIY----FGQLRLVQSYLGVILAHSCIALPMSTL 144

Query: 78  LASAALGCLIGFAVAAAVVLGGLPQRIRGPLLTFSGVASQFAGVPLAFAFIAT 130
           + +AAL         AA+ LG  P      L+TF  +   F    L FAFIA+
Sbjct: 145 ILTAALKGFDRSVERAAMNLGASP-FATFRLITFPILRPAFTVAGL-FAFIAS 195