Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 39/278 (14%)

Query: 59  AFKAKYPEITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAE--GLL 116
           AF  KY    VN      GS   +  + A K+N  P+A   V  G    PQ +A    LL
Sbjct: 47  AFAEKY---NVNTSFVRNGSGSTLAKIDAEKNN--PRAD--VWYGGTLDPQSQAGEMDLL 99

Query: 117 QPYKVSTWAEIPDNVKDA----DGYWYGDYYGVMSMFVNKDLVKN----VPKDWADLLKP 168
           Q Y+    A I +  +D       Y    Y G++   VN + +      +P+ WADL KP
Sbjct: 100 QAYQSPELANIMEGFRDPAKRKGNYSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKP 159

Query: 169 EYSGQVALAGDPRASNQAILGVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIG- 227
           EY G++ ++ DP++S     G     L+T  +   E      +YF  L+K  +     G 
Sbjct: 160 EYKGEIQIS-DPQSS-----GTAYTALATFIQLWDE--PTAFEYFKKLDKNVSQYTKSGV 211

Query: 228 -KAGTLAQGATPIIVAW--DYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQGISAY--A 282
             +   A+G   I + +  DY+    K       P E++ P +G   G  + G+S    A
Sbjct: 212 TPSRNSARGEVAIGIGFLHDYSLEQAK-----GAPLELISPCEG--TGYELGGVSIIKGA 264

Query: 283 PHPNAAKLWMEHLYSDDGQ-LGWLKGYCHPIRFNAMVK 319
            + + AKL+++ + S +GQ + W +G  + I  N   +
Sbjct: 265 RNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQAE 302