Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 47.0 bits (110), Expect = 8e-10
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 21/213 (9%)

Query: 95  QAPDVVDVGLAFGPQMKAEGLLQPY---KVSTWAEIPDNVKDADGYWYGDY-----YGVM 146
           Q  D+V     F  +M+ EG+LQ     K+S +  +  N  D       DY       + 
Sbjct: 74  QGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYSIPHVVAIT 133

Query: 147 SMFVNKDLVK-NVPKDWADLLKPEYSGQVALAGDPRASNQAILGVLAAGLSTGAKSGKEA 205
            + VN D+   N  + W DL KPE  GQ+ L  D R      L  L  G S  +   K+ 
Sbjct: 134 GLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKL--GYSGNSTDDKQI 191

Query: 206 GEAGLKYFADLNKAGNFLPVIGK---AGTLAQGATPIIVAWDYNALSWKKTLNDNPPTEV 262
            EA    +A+L K    + V      A     G   + + W+ +A + +K   +  P ++
Sbjct: 192 DEA----YAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQK---EGLPIKL 244

Query: 263 VVPEKGVLAGVYVQGISAYAPHPNAAKLWMEHL 295
           V P++G +  V    IS+ A + +AA   ++ L
Sbjct: 245 VFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFL 277