Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 34/237 (14%)

Query: 78  SADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIPDNVKDADGY 137
           S + +  +KA + N  P A   +  G+      + +GLL+ YK     +I     + DGY
Sbjct: 68  SGEALSRLKAEQSN--PSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDIDPLFVEEDGY 125

Query: 138 WYGDYYGVMSMFVNKDLVKN----VPKDWADLLKPEYSGQVALAGDPRASNQAILGVLAA 193
           W G     + +  N DL+       P+ W DL+  +Y G++ +A +P  S  A   +   
Sbjct: 126 WTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGEL-IASNPTVSGTAYFTICGI 184

Query: 194 GLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGKAGTLAQGATPIIVAWDYNALSWKKT 253
               G   G    +   +    L K G+    +  AG  A G  P               
Sbjct: 185 LQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAP--------------- 229

Query: 254 LNDNPPTEVVVPEKGVLAGVYVQ---------GISAYAPHPNAAKLWMEHLYSDDGQ 301
              +P T V+   +  +  V++           I + A HP  AK++++   S +GQ
Sbjct: 230 ---DPHTTVIADSELPVKSVFLNKVIWWPSPVSIVSGAKHPENAKIFVDWCLSKEGQ 283