Pairwise Alignments

Query, 233 a.a., transcriptional regulator, TetR family from Agrobacterium fabrum C58

Subject, 196 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 2/171 (1%)

Query: 43  RPREFDLDRALDGAIRVFSRRGYHATSVGDLTDAMELAQGSLYKAFKDKKAIFIATMERY 102
           R   FD    L  A+ +F ++GY  TSV DL D +++ + SLY +F DK +++   +  Y
Sbjct: 3   RSCNFDRQEKLVEAMELFWQKGYADTSVADLVDHLKINRFSLYNSFGDKLSLYREALAYY 62

Query: 103 RIVQTERFEAAVAGGETGYERLRAGLMFYAERSHGGVGSDGCLVVGAAADLAALDDDIAV 162
                      +     G + L   L  +  R        GC +  A  +    D+ +  
Sbjct: 63  FDNHAMPNLTPLFAETAGLDELVTYLEEFIVRQSN--QPFGCFLQNAVLEKYLSDEVVQG 120

Query: 163 VVERAVKARERIVARIITEGQKDGSVHSTADPDDLARAMLCMMYGMRVVGK 213
           +  R      +   R++   Q+ G + +      LA  ++  M G+RV+GK
Sbjct: 121 ICTRLFDELHQTFERVLQGAQQRGELSAGVQCTQLASFLVMQMQGIRVLGK 171