Pairwise Alignments

Query, 549 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Vibrio cholerae E7946 ATCC 55056

 Score =  615 bits (1585), Expect = e-180
 Identities = 305/553 (55%), Positives = 410/553 (74%), Gaps = 7/553 (1%)

Query: 4   QFIYHMAGLNKSYGAKK-VLENVHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYTGE 62
           +++Y M+ ++K    K+ +L+++ LSF+P AKIG+LG NGAGKST+L+IMAG+DK+  GE
Sbjct: 3   EYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGE 62

Query: 63  AWLAEGATLGYLEQEPKLDENKTVMENVMEGVASKTAIVDRYNELMMNYSDETAD----- 117
           A    G  +GYL QEPKLDE+KTV E V E VA     + R +E+   Y++  AD     
Sbjct: 63  ARPQPGLKVGYLPQEPKLDESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALA 122

Query: 118 -EGAKLQDMIDSQNLWDLENQVEMAMDALRCPPGDSAVTGLSGGERRRVALCKLLLSQPD 176
            E  +L+ +I ++N  +L+N +E A DALR P  D+ V  LSGGERRRVA+C+LLL  PD
Sbjct: 123 KEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLENPD 182

Query: 177 LLLLDEPTNHLDAETIAWLEKHLRDYPGAVMMITHDRYFLDNVTGWILELDRGRGIPYEG 236
           +LLLDEPTNHLDAE++AWLE+ L DY G V+ ITHDRYFLDN  GWILELDRG GIP++G
Sbjct: 183 MLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPWQG 242

Query: 237 NYSAYLQAKAKRMQQEAREDASRQKAISREQEWIASSPKARQTKSKARIRAYDELVEAAE 296
           NY+++L+ K  R++QEA ++ +RQK I +E EW+  +PK RQ KSKAR+  ++EL     
Sbjct: 243 NYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEH 302

Query: 297 NRRPGDAQIVIPVAERLGRVVIEAENLTKSYGDRVLIENLTFKLPPGGIVGVIGPNGAGK 356
            +R    ++ IP  ERLG  VIE +NLTKS+  RVLI++L+F +P G IVG+IGPNGAGK
Sbjct: 303 QKRNETNELFIPPGERLGDKVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGK 362

Query: 357 TTLFRMITGQEQPDSGSVTVGETVHLGYVDQSRDTLAGDKTVWEEISGGNDIIKLGKFEV 416
           +TLF+M++G E+PDSG++ +G+TV L  VDQ RD++    TV++EIS G DII++  FE+
Sbjct: 363 STLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNFEI 422

Query: 417 NSRAYCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKAGGNVLLLDEPTNDLDTETLAA 476
            +RAYC  FNFKG DQQ+ +G LSGG+RNRVHLAK+LKAGGNVLLLDEPTNDLD ETL A
Sbjct: 423 PARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRA 482

Query: 477 LEEALEAFAGCAVIISHDRMFLDRLATHILAFEGDSHVEWFEGNFEDYEKDKVRRLGPES 536
           LEEAL  F GCA++ISHDR FLDR+ATHIL +  +  V ++EGN+ +Y +   + LG ++
Sbjct: 483 LEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGAQA 542

Query: 537 IKPGRVSYKRLTR 549
            +P R+ YKR+T+
Sbjct: 543 AEPHRIKYKRITK 555