Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13) from Pseudomonas fluorescens FW300-N2E2

 Score =  277 bits (709), Expect = 5e-79
 Identities = 181/480 (37%), Positives = 246/480 (51%), Gaps = 41/480 (8%)

Query: 30  ITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAV---VSGHAVE--ADVPVLVVT 84
           +  DSR    G LF+AV G + DG A++ DA+ +GA AV   V+G  V    DVP++ V 
Sbjct: 21  LALDSRNVRAGDLFLAVPGARFDGRAHIADALKRGAAAVAYEVAGATVLPITDVPLIPVK 80

Query: 85  DPRLYLSLAASRFYGKQPD--TMVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIA 142
                LS  A RFYG       +V VTGT GKTSV   V Q     G     +GT G   
Sbjct: 81  GLAAQLSDIAGRFYGDPSRHLNLVGVTGTNGKTSVTQLVAQALDLLGQHCGIVGTLGNGF 140

Query: 143 PGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTNLG 202
            G  + G  TTP+P+ + A LA+L   G    AME SSHGLDQ R+  +    A  TNL 
Sbjct: 141 HGALESGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHGLDQGRVTALAFDVAVLTNLS 200

Query: 203 RDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSD---KAIGAAREAGLEVRTV 259
           RDH+DYH T++ Y  AK +LF                 W+D   + I    E G ++   
Sbjct: 201 RDHLDYHGTMQAYGEAKAKLF----------------AWNDLKCRVINLDDEFGRQLAAE 244

Query: 260 GRNGQYLT--LKRVEHFRHKQMIEVHHDGVIFEVDIP---------LAGDFQVANALVAA 308
            R  + +T  L+    + + +  + + +GV   +  P         L G F ++N L A 
Sbjct: 245 KRESRLITYSLEDASAYLYVRQAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNVLAAI 304

Query: 309 GLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVRPF 368
           G  +         LK L KL G AGR++ +G      L  VDYAH PDALE VLT++RP 
Sbjct: 305 GALLGLDYALDEVLKVLPKLEGPAGRMQRLGGGTQ-PLVVVDYAHTPDALEKVLTALRPH 363

Query: 369 TSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMA---AA 425
             GR++ +FGCGGDRD+GKRP+M EV  RL+D V+VTDDNPR+ED   I  ++ A   A 
Sbjct: 364 AKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPQRIFDDIRAGFTAV 423

Query: 426 AGALEIGDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRSALAELE 485
                +  R +AI   ++  S  D +++AGKGHE+ Q +      FSD  +   AL   E
Sbjct: 424 DNVTFVAGRGQAIAQLIASASADDVIVLAGKGHEDYQEINGERHAFSDLVEADHALTAWE 483