Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  257 bits (657), Expect = 6e-73
 Identities = 166/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)

Query: 16  ELLLSEIGAIEIGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSGHAVE 75
           EL   ++ A+ I  +  DSR    G  FVA+ G   DG  ++  A+A+GA  V++    +
Sbjct: 33  ELTDPKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQ 92

Query: 76  ---------ADVPVLVVTDPRLYLSLAASRFYGKQPDTMVAVTGTAGKTSVASFVRQIWA 126
                    A VPV+ + +   +LS  A R YG   + ++ VTGT GKT++   + Q   
Sbjct: 93  HLNGWVEYRAGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLE 152

Query: 127 FAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQR 186
             GH AA +GTTG       +  A TT + + + A L +LA  G  + A+E SSHGL Q 
Sbjct: 153 LLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQG 212

Query: 187 RLDGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAI 246
           R+  +H  A  F+NL RDH+DYH T+E Y AAK  LF     + A  +I  DD    + +
Sbjct: 213 RVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNA--IINVDDAVGAQWV 270

Query: 247 GAAREA-GLEVRTVGRNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANAL 305
               +A G+ + T     Q +  + V +      +         E+  PL G+F   N L
Sbjct: 271 KQLPQAIGVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLL 330

Query: 306 VAAGLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSV 365
           +A    +S G   +  L    KL    GR+EL  Q +  A   VDYAH PDALE  L ++
Sbjct: 331 LALATLLSLGFEKSALLATAPKLRPVLGRMELF-QREQKAKMVVDYAHTPDALEKALRAL 389

Query: 366 RPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAA 425
           R   +G++  + GCGGDRD+GKRP+M  +A + +D VI+TDDNPRSE    I ++++A  
Sbjct: 390 RVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVA-- 447

Query: 426 AGALEIGDRAEAIRHAVSMLSHG-------DTLIVAGKGHEEGQIVGSVTLPFSDHEQVR 478
              L   +RA    H     S+        D +++AGKGHE+ Q++ + T+ +SD E  +
Sbjct: 448 --GLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQ 505

Query: 479 SAL 481
             L
Sbjct: 506 QLL 508