Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 80/317 (25%), Positives = 126/317 (39%), Gaps = 26/317 (8%)

Query: 27  IGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSGHAVEADVPVLVVTDP 86
           +  ++ DSR     +LFVA+ G + D   +   AV  GAVA++    ++A+   LVV D 
Sbjct: 24  VSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERELDAECSQLVVADT 83

Query: 87  RLYLSLAASRFYGKQPDTMVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIAPGRE 146
           +  L    S  + +     VA+TG+ GKT+V   V  I +  G      G          
Sbjct: 84  KQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNF------NN 137

Query: 147 DYGALTTPDPVTLHALLAE----LASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTNLG 202
           D G      P+TL     E    +   G  H    A +  L       V    A   N+ 
Sbjct: 138 DIGV-----PLTLLRSTTEDDYAVIELGANHVGEIAYTTAL-------VKPDVALVNNVA 185

Query: 203 RDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSD--KAIGAAREAGLEVRTVG 260
             H++   +++    AK  ++  L + GA A++  D    D  KA+ A +       T  
Sbjct: 186 AAHLEGFGSMDGVKRAKGEIYQGL-QAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDH 244

Query: 261 RNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANALVAAGLAMSTGVPAAT 320
               Y    R+          V   G +  V++ + G   VANAL AA L++  G   A 
Sbjct: 245 NADFYPRDVRLNALGIASFTLVTPVGEV-GVELGIMGQHNVANALAAAALSLEMGASLAE 303

Query: 321 ALKALEKLVGAAGRLEL 337
             + L  L    GR+++
Sbjct: 304 IGQGLAHLSKVKGRVDM 320