Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 494 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE from Phaeobacter inhibens DSM 17395

 Score =  408 bits (1049), Expect = e-118
 Identities = 228/484 (47%), Positives = 293/484 (60%), Gaps = 12/484 (2%)

Query: 14  LKELLLSEIGAIE--IGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSG 71
           L +L L+  G ++  I GI  DSRK   G LF A+ G++  GA +   A+  GA A+++ 
Sbjct: 9   LSQLGLTARGGVDPMIRGIAVDSRKVVEGGLFAALPGSQVHGAKFTPAALGNGAAAILTD 68

Query: 72  HAV---------EADVPVLVVTDPRLYLSLAASRFYGKQPDTMVAVTGTAGKTSVASFVR 122
            A          E+ V ++VV DPR  L+ AA+ ++G QP+TMVAVTGT GKTSVASFVR
Sbjct: 69  AAGAQIVAQLLRESTVALVVVEDPRQALAYAAALWFGAQPETMVAVTGTNGKTSVASFVR 128

Query: 123 QIWAFAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHG 182
           QIW   GH A  +GTTGV           TTP+PVTLH  LA+ A+ GVTHAAMEASSHG
Sbjct: 129 QIWVELGHQAVNLGTTGVEGSWSHPLNH-TTPEPVTLHDALAQAAAAGVTHAAMEASSHG 187

Query: 183 LDQRRLDGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWS 242
           L+QRRLDGVHL+AAGFTN  +DH+DYH T E Y  AK  LF  ++     AVI  DDP  
Sbjct: 188 LEQRRLDGVHLAAAGFTNFTQDHLDYHETFEAYFTAKAGLFRRVLPDDGVAVINMDDPRG 247

Query: 243 DKAIGAAREAGLEVRTVGRNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVA 302
           ++    A   G EV +VGR    L+L    +    Q +        ++  + L G FQ  
Sbjct: 248 EQMRAVAAARGHEVISVGRGLGDLSLVGARYDASGQDMRFTWHDKPYQARLNLIGGFQAE 307

Query: 303 NALVAAGLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVL 362
           N L+A GL +++G         L  L    GR++L    +NGA  +VDYAH PDA+   +
Sbjct: 308 NILLACGLVIASGEDPQAVFDTLPHLQTVRGRMQLAATRENGATVFVDYAHTPDAVATAI 367

Query: 363 TSVRPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVM 422
            ++RP   GR++ + G GGDRD  KRP+MG+ A   +D+VIVTDDNPRSED A IR+ V 
Sbjct: 368 KALRPHVLGRLVAIVGAGGDRDAAKRPLMGQAAQNNADLVIVTDDNPRSEDPAVIRAAVK 427

Query: 423 AAAAGALEIGDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRSALA 482
             A  A+E+GDRAEAI   V  L  GD L++ GKGHE GQIVGS  LPF D EQ   A+A
Sbjct: 428 GGAPDAMEVGDRAEAILRGVDALGAGDALLICGKGHETGQIVGSDVLPFDDVEQASMAVA 487

Query: 483 ELEG 486
            L+G
Sbjct: 488 VLDG 491