Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 485 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  244 bits (624), Expect = 4e-69
 Identities = 155/467 (33%), Positives = 239/467 (51%), Gaps = 30/467 (6%)

Query: 26  EIGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSGHAVEAD---VPVLV 82
           EI  +  DSRK     +F A+ GT ADG  ++   + +GA  ++  +  E     +  + 
Sbjct: 22  EINALNFDSRKVGKDDVFFAIVGTLADGHQFIGQTIQQGAAVIICENLPEIQDFTITYIK 81

Query: 83  VTDPRLYLSLAASRFYGKQPDTM--VAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGV 140
           V +  + L + A  ++G     +  + +TGT GKT++A+ + +++   G+    + T   
Sbjct: 82  VENTSVALGIIAGNYFGNPSADLKLIGITGTNGKTTIATILFKLFKDLGYKTGLLSTVEN 141

Query: 141 IAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTN 200
                      TTP+P+ L+ LL E+   G  +  ME SSH + Q R++G+  S   F+N
Sbjct: 142 YINDTVVAATHTTPNPIALNQLLREMVDAGCDYCFMEVSSHAVSQHRIEGLTFSGGVFSN 201

Query: 201 LGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAIGAAREAGLEVRTVG 260
           L  DH+D+H T + Y+ AK   FD L  K A A+   DD          +   + ++   
Sbjct: 202 LTHDHLDFHKTFDSYLKAKKAFFDVL-PKSAFALTNIDD----------KNGVVMLQNTK 250

Query: 261 RNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVD-----IPLAGDFQVANALVAAGLAMSTG 315
            + +   LK++  F+ K +IE    G+  ++D       L G F   N L   G A+   
Sbjct: 251 AHKKTYALKQLADFKAK-IIENQFSGLHLDIDNEDVYFKLVGSFNAYNLLAVYGTAILLE 309

Query: 316 VPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVRPFTSG--RI 373
                 L  L +L GA GR + +  + +  +  VDYAH PDA++NVL+++     G  ++
Sbjct: 310 QDKLKVLTLLSRLSGAEGRFDYI-TSADKIIGIVDYAHTPDAVQNVLSTIANIRKGTEQV 368

Query: 374 ITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAAA-----GA 428
           ITV GCGGDRDK KRPIM +VA   SD VI+T DNPR+EDA TI +++ A  +       
Sbjct: 369 ITVIGCGGDRDKTKRPIMAQVACDWSDKVILTSDNPRTEDAQTIINDMEAGVSPTNKRKT 428

Query: 429 LEIGDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHE 475
           L I DR EAI+ A  +   GD ++VAGKGHE+ Q +  V   F D E
Sbjct: 429 LSILDRREAIKTACHLAQPGDIILVAGKGHEKYQEINGVRNHFDDKE 475