Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 494 a.a., Probable UDP-N-acetylmuramate-alanine ligase MurC from Mycobacterium tuberculosis H37Rv

 Score = 68.9 bits (167), Expect = 4e-16
 Identities = 107/436 (24%), Positives = 158/436 (36%), Gaps = 75/436 (17%)

Query: 59  DAVAKGAVAVVSGHA---------VEA---DVPVLVVTDPRLYLSLAASRFYGKQPDTMV 106
           D +  GA AVV+ HA         VEA    +PV  V  P +   L A R       T +
Sbjct: 68  DLLPGGATAVVTTHAAIPKTNPELVEARRRGIPV--VLRPAVLAKLMAGR-------TTL 118

Query: 107 AVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAEL 166
            VTGT GKT+  S +         A    G     A G E   A T     +    +AE 
Sbjct: 119 MVTGTHGKTTTTSMLIV-------ALQHCGLDPSFAVGGELGEAGTNAHHGSGDCFVAEA 171

Query: 167 -ASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLFDT 225
             S+G   + ++ + H              A  TN+  DH+D++ ++E Y+A    +FD+
Sbjct: 172 DESDG---SLLQYTPH-------------VAVITNIESDHLDFYGSVEAYVA----VFDS 211

Query: 226 LMEK---GAPAVIFADDPWSDKAIGAAREAGLEVRTVGR-----------NGQYLTLKRV 271
            +E+   G   V+  DDP        A E G+ V   G            + Q   +  V
Sbjct: 212 FVERIVPGGALVVCTDDPGGAALAQRATELGIRVLRYGSVPGETMAATLVSWQQQGVGAV 271

Query: 272 EHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANALVAAGLAMSTGVPAATALKALEKLVGA 331
            H R    +       +  + +P  G     NAL A   A+  G PA   L  L    G 
Sbjct: 272 AHIRLASELATAQGPRVMRLSVP--GRHMALNALGALLAAVQIGAPADEVLDGLAGFEGV 329

Query: 332 AGRLELVGQT---KNGALAYVDYAHKPDALENVLTSVRPF----TSGRIITVFGCG-GDR 383
             R ELVG     K     + DYAH P  +   L + R        GR + VF      R
Sbjct: 330 RRRFELVGTCGVGKASVRVFDDYAHHPTEISATLAAARMVLEQGDGGRCMVVFQPHLYSR 389

Query: 384 DKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMA--AAAGALEIGDRAEAIRHA 441
            K      G       ++ ++     R +  A +    +A         + D +   +  
Sbjct: 390 TKAFAAEFGRALNAADEVFVLDVYGAREQPLAGVSGASVAEHVTVPMRYVPDFSAVAQQV 449

Query: 442 VSMLSHGDTLIVAGKG 457
            +  S GD ++  G G
Sbjct: 450 AAAASPGDVIVTMGAG 465