Pairwise Alignments

Query, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

Subject, 486 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  315 bits (808), Expect = 2e-90
 Identities = 196/484 (40%), Positives = 256/484 (52%), Gaps = 27/484 (5%)

Query: 16  ELLLSEIGAIEIGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSG---- 71
           + LL  + A  +  I  DSR+  PG +FVAV G   DGAA++  AVA+GA  VV      
Sbjct: 9   DTLLGRVAAT-LPQIRTDSRRVGPGDVFVAVPGVAVDGAAFITQAVAQGATMVVCRADGL 67

Query: 72  -HAVEADVPVLVVTDPRLYLSLAASRFYGKQ--PDTMVAVTGTAGKTSVASFVRQIWAFA 128
            H  EA   V V  DPR  L       YG    P  +V VTGT GKT++   +  ++A A
Sbjct: 68  QHLPEAAFAVAVHDDPRAALGALGQARYGTASLPFPVVGVTGTNGKTTITYLLEHLFASA 127

Query: 129 GHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRL 188
           G     +GT     PG  +   LTTPD + LH +L ++A  GV  A ME SSH LDQ R+
Sbjct: 128 GRRCGVLGTVSYRWPGHVEAAPLTTPDCLQLHEMLGQMAGAGVDVAFMEVSSHALDQERV 187

Query: 189 DGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDK---- 244
            G+  + A  TNL +DH+DYH  +E Y  AK RLF  L E G    + ADDPW  +    
Sbjct: 188 AGIRFAGAVLTNLTQDHLDYHGDMETYFNAKARLFRELPEVGKHCAVNADDPWGRRLLAD 247

Query: 245 ---AIGAAREAGLEVRTVGRNGQYLTLKRV-EHFRHKQMIEVHHDGVIFEVDIPLAGDFQ 300
              A+G A        T   +G+ L       H R      +H +G  +EVD PL G   
Sbjct: 248 LPGAVGFALTGAPVSGTRHLHGEMLRCSTAGVHLR------MHFEGRTWEVDSPLVGAHN 301

Query: 301 VANALVAAGLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALEN 360
            +N L    + +  G+  A  +  LE   G  GRLE +   + G   +VDYAH PDAL N
Sbjct: 302 ASNLLAVQAVGLGLGLSPADFVH-LENFTGVPGRLERITNDR-GLDVFVDYAHTPDALVN 359

Query: 361 VLTSVRPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSE 420
           VL ++R     RI+TVFGCGG+RD+ KRP+MG      +D+ ++T DNPR ED   I  +
Sbjct: 360 VLRALRDVGFTRIVTVFGCGGNRDRTKRPLMGAAVAAHADVAVLTSDNPRHEDPLAIMED 419

Query: 421 VMAAAAGALEI---GDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQV 477
           V    AGA E+    DR +AI  A+ ML  GD L+VAGKGHE+ Q VG   LPFSD + +
Sbjct: 420 VKPGLAGAREVVAEADRRKAIALALEMLRPGDALLVAGKGHEDYQQVGDRKLPFSDQQTI 479

Query: 478 RSAL 481
           R  L
Sbjct: 480 REIL 483