Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 455 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  214 bits (546), Expect = 4e-60
 Identities = 151/459 (32%), Positives = 227/459 (49%), Gaps = 19/459 (4%)

Query: 6   TVADMIAITAGRPVGNLPTGITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGAS 65
           ++  + A T GR  G     ++ +  DSR +  G  F A+KG+R DGH++   A A GAS
Sbjct: 5   SLTQLAAATHGRLCGE-DVVVSHLDSDSRKMTVGSLFVALKGERFDGHEFAEAAAAAGAS 63

Query: 66  LLVVAEAKLPALGRLTVPMIVVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTKEML 125
            L+V E +LP    L +P +VV D   A+G++    R+  +   +A+TGS GKT+ KEM+
Sbjct: 64  ALLV-ERELP----LALPQLVVADTQKAMGQIGALVRDSVNPVCVALTGSNGKTSVKEMV 118

Query: 126 RQALAPSGRVHAAVASFNNHWGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHV 185
              L+    V     +FNN  GVPLTL R+    E+GVFE+G NH GEI     +VRP V
Sbjct: 119 ATVLSQHHSVLFTAGNFNNEIGVPLTLLRLEQGHEYGVFELGANHKGEIDYTSSLVRPSV 178

Query: 186 AIITTIAPAHLGNFKNIEEIAAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGIEH 245
           +++  +  AHL  F +   +A AK+EI+  + + G  I+N D+   E +    +    + 
Sbjct: 179 SLVNNVGSAHLEGFGSEAGVAEAKSEIYLHLAQDGVGIVNLDDRYAETMLNKLKG---KR 235

Query: 246 ILTFGQHAKADFRLADFESTTTGS-TIWAILNGETSELHINIPGRHIADNAMAVLGAVAV 304
           +LTFG  A A+    +  +   G  + +    G+   + + + G+H   NA+A       
Sbjct: 236 VLTFGLGAGAEITAREVTADAFGRYSFYLCHGGDHVTVSLPLAGKHQVSNALATAAICIA 295

Query: 305 TGANLDRALEALGTLEAVKGRGQRHHLTINGGSFLLIDESYNANPASMRAAIAVLAETET 364
            G  L      L  L  VKGR     L    G  LL+D+SYNANP S+ AAI  L E  T
Sbjct: 296 LGLPLQEIAAGLAKLAPVKGRMMPRQL----GRLLLVDDSYNANPNSVGAAIDWLKEIST 351

Query: 365 QGHGRRVAVLGDMLEMGEFSAQLHEELAGPLLAAGIEHVWLAGEAMAALRDALPDSVTVI 424
                R  VLGD+ E+G+ +A LH EL      AG++ ++  G        A        
Sbjct: 352 ----NRTLVLGDLGELGDNAALLHFELGQKAKEAGLDSLFCLGSLSRHASQAFGSKHFEE 407

Query: 425 WFPTTAELTDFALQWVQPGDALMVKSSLGLGFGKIVAAL 463
                +EL ++ +  V+    L+VK S      ++V AL
Sbjct: 408 LDALVSELINY-INGVEGDVTLLVKGSRSAAMERVVEAL 445