Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 470 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase MurF from Phaeobacter inhibens DSM 17395

 Score =  331 bits (848), Expect = 4e-95
 Identities = 199/463 (42%), Positives = 267/463 (57%), Gaps = 14/463 (3%)

Query: 4   LWTVADMIAITAGRPVGNLPTGITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANG 63
           LWT  +  A T G+ VG+    + GISID+R++  G+ F A+K  R DGHD+ + A+  G
Sbjct: 3   LWTAEEAAAATGGQAVGDWR--VDGISIDTRSIAAGDLFVALKAAR-DGHDFVAQALEKG 59

Query: 64  ASLLVVAEAKLPALGRLTVPMIVVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTKE 123
           A   +V+  + P       P+++V+DV  AL  L  A R RT AR+IAVTGSVGKT+TKE
Sbjct: 60  AGAALVS--RRPEGVGDDAPLLLVDDVQTALEALGRAGRARTDARVIAVTGSVGKTSTKE 117

Query: 124 MLRQALAPSGRVHAAVASFNNHWGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRP 183
           ML + L+  GR HAAVAS+NNHWGVPLTLARMP DTEF V EIGMNH GEI PL K  RP
Sbjct: 118 MLARMLSDQGRTHAAVASYNNHWGVPLTLARMPRDTEFAVIEIGMNHPGEISPLAKQARP 177

Query: 184 HVAIITTIAPAHLGNFKNIEEIAAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGI 243
           HVA++TT+AP HL  F  IE IAA KA I +G+E GG  +LN D A+   L+  A+    
Sbjct: 178 HVAMVTTVAPVHLEAFDGIEGIAAEKAAIIDGLEPGGVAVLNADIAEAPILQSVAERV-T 236

Query: 244 EHILTFGQHAKADFRLADFESTT-TGSTIWAIL---NGETSELHINIPGRHIADNAMAVL 299
             +  FG             +TT  G    A++   N +T  LHI   G H A NA+  L
Sbjct: 237 HDVQWFGTGTGPIAPTYHLTATTLRGDETLALVTLPNAQTHRLHIQSLGAHFAMNALGAL 296

Query: 300 GAVAVTGANLDRALEALGTLEAVKGRGQRHHLTING--GSFLLIDESYNANPASMRAAIA 357
             +A    +L +A+++L     V GRG R  +++    G  LL+D+SYNANP S+ AA+A
Sbjct: 297 ACLAALDLDLAKAVQSLSLWSPVTGRGARETVSLGAGQGEILLLDDSYNANPTSVAAALA 356

Query: 358 VLAETETQGHGRRVAVLGDMLEMGEFSAQLHEELAGPLLAAGIEHVWLAGEAMAALRDAL 417
           VLA T     GRR+A LGDM E+G    +LH +LA       ++ +   G  M AL  AL
Sbjct: 357 VLAATPCA--GRRIAYLGDMKELGPQEQRLHSDLADLDAVQALDEIHCIGPLMGALHAAL 414

Query: 418 PDSVTVIWFPTTAELTDFALQWVQPGDALMVKSSLGLGFGKIV 460
           P       + T+ ++       +  GD ++ K SL +   K+V
Sbjct: 415 PAEKRGGHYATSDDVRADLAGQIAAGDVVLAKGSLSMALAKVV 457