Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 432 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  161 bits (408), Expect = 4e-44
 Identities = 123/433 (28%), Positives = 204/433 (47%), Gaps = 32/433 (7%)

Query: 29  ISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGASLLVVAEAKLPALGRLTVPMIVVE 88
           IS D+R +  G  FFA+KG+  + +++ + A+  GA+  VV E K     +     ++VE
Sbjct: 16  ISTDTRNISPGCIFFALKGNLFNANEFAAQAIEKGAAYAVVDEEKYATNNQC----LLVE 71

Query: 89  DVLAALGKLALAARERTSARIIAVTGSVGKTTTKEMLRQALAPSGRVHAAVASFNNHWGV 148
           DVL  L  LA   R++ +  +I +TGS GKTT+KE++   L    +  A   + NNH GV
Sbjct: 72  DVLNTLQDLARHHRKKLNIPVIGLTGSNGKTTSKELVNAVLTERYKTFATFGNLNNHIGV 131

Query: 149 PLTLARMPADTEFGVFEIGMNHSGEIRPLVKMVRPHVAIITTIAPAHLGNFKNIEEIAAA 208
           PL++  +  + +  V E+G NH  EI  L  + +P   IIT +  AHL  F   E +   
Sbjct: 132 PLSILSITDEVQIAVIEMGANHQKEIELLCTIAQPTHGIITNVGMAHLDGFGGFEGVKKG 191

Query: 209 KAEIFEGVEE-GGSVILNRDNAQFEQLEEAAQEAGIEHILTFGQH----AKADFRLAD-- 261
           KAE++  ++E  G   +NRDN     L E +  AG+  ++ +G       K   + +D  
Sbjct: 192 KAELYAYLKETQGYTFINRDN---PYLIEMSAAAGLNKLIYYGTENGNTIKGSLKSSDPF 248

Query: 262 FESTTTGSTIWAILNGETSELHINIPGRHIADNAMAVLGAVAVTGANLDRALEALGTLEA 321
            E   T   I+       S +  N+ G +  +N +A +        N +     L   + 
Sbjct: 249 IEVDWTNHEIF-------SSVKTNLTGSYNFENILAAICIGDFFDMNPEEINAGLADYQP 301

Query: 322 VKGRGQRHHLTINGGSFLLIDESYNANPASMRAAIAVLAETETQGHGRRVAVLGDMLEMG 381
              R Q      N     +I + YNANP+SM AA+  +A        ++ A+LGDM E+G
Sbjct: 302 KNNRSQLTKTEKN----TVICDFYNANPSSMTAALKNIAALSA---NKKTAILGDMFELG 354

Query: 382 EFSAQLHEELAGPLLAAGIEHVWLAGEAMAALRDALPDSVTVIWFPTTAELTDFALQWVQ 441
             S   HE +A     +G++ +   G+   A +    +++  ++F T AE   +      
Sbjct: 355 PESPGQHEIIAKQAGESGLDQLIFIGKDFYAFK----NTIKGLFFETPAEAAQYLQDNPV 410

Query: 442 PGDALMVKSSLGL 454
               +++K S G+
Sbjct: 411 QDHLVLLKGSRGM 423