Pairwise Alignments

Query, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

Subject, 479 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  344 bits (882), Expect = 4e-99
 Identities = 214/473 (45%), Positives = 269/473 (56%), Gaps = 16/473 (3%)

Query: 1   MSWLWTVADMIAITAGRPVGNLPTGITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAV 60
           MS LWT A+  A T G+  G+    +TG+SID+R +  G+ F A+   R DGHD+ + A+
Sbjct: 1   MSALWTAAEAAAATGGQARGDW--AVTGVSIDTRELAPGDLFVALTAAR-DGHDFVAQAL 57

Query: 61  ANGASLLVVAEAKLPALGRLTVPMIVVEDVLAALGKLALAARERTSARIIAVTGSVGKTT 120
           A GA   +V+  ++P       P+++V DV  AL  L  A R RT AR+IA+TGSVGKT+
Sbjct: 58  AAGAGAALVS--RIPEGVAEDAPLLLVPDVQTALEALGRAGRARTEARVIAITGSVGKTS 115

Query: 121 TKEMLRQALAPSGRVHAAVASFNNHWGVPLTLARMPADTEFGVFEIGMNHSGEIRPLVKM 180
            KEM+R ALA  GR HAA  SFNNHWGVPLTLARMPA TE  V EIGMNH GEI PL +M
Sbjct: 116 AKEMMRAALASQGRAHAAERSFNNHWGVPLTLARMPAGTEVAVIEIGMNHPGEIAPLARM 175

Query: 181 VRPHVAIITTIAPAHLGNFKNIEEIAAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQE 240
            RPH A+ITTIA AHL    ++E IA  KA IFEG+E  G  ++  D  Q   L  AA++
Sbjct: 176 ARPHAALITTIAAAHLEALGSLEAIAVEKASIFEGLEPDGLAVIPGDLPQTPILRAAAED 235

Query: 241 AGIEHILTFGQHAKADFRLADFESTTTGSTIWAILNGETSELHINIPGRHIADNAMAVLG 300
           AG   I +FG  A    RL+D ++  T +   A L+G    L I  PG H  + A+ VL 
Sbjct: 236 AG-ARIESFGTGAGNTHRLSDVQAVGTAAVARAQLSGAEMALKIATPGTHFLETALGVLA 294

Query: 301 AVAVTGANLDRALEALGTLEAVKGRGQRHHL----TINGGSFLLIDESYNANPASMRAAI 356
            VA  GA+  RAL ALG      GRG R  L     I   S  LID+++NANP SM AA+
Sbjct: 295 CVAGVGADPARALMALGAWAPPSGRGTRERLQLDPVIEAMSIELIDDAFNANPTSMGAAL 354

Query: 357 AVLAETETQ------GHGRRVAVLGDMLEMGEFSAQLHEELAGPLLAAGIEHVWLAGEAM 410
            +LA+            GRR+A+LGDMLE+G   A +H  LA     A I  V   G  M
Sbjct: 355 DMLAQAAPAHDIGRIAKGRRIAILGDMLELGPDEAAMHAALAAHPAMAQITLVHCVGPRM 414

Query: 411 AALRDALPDSVTVIWFPTTAELTDFALQWVQPGDALMVKSSLGLGFGKIVAAL 463
            AL  ALP+     W  T   L   A   V  GD ++VK S G     +V AL
Sbjct: 415 QALHAALPEDKRGRWVETAQALVPHAHALVDAGDVVLVKGSKGSRVSLVVDAL 467