Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (464), Expect = 1e-50
 Identities = 140/456 (30%), Positives = 206/456 (45%), Gaps = 42/456 (9%)

Query: 12  VALFGLGGSGLVTARALVAGGAAVVAFDDNPDSVAKAQAEGIATADLHTIDWS-----SF 66
           V + GLG +GL     L     +V     +       Q +  +   LH   W+     + 
Sbjct: 14  VVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSGWNLEWLLNA 73

Query: 67  SSFVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRVHAPDCPFIAITGTNGKS 126
              V  PG+ L  P+    +    AAG+ V+GDIELF         D P IAITG+NGKS
Sbjct: 74  DLVVTNPGIALATPE----IQQVLAAGIPVVGDIELFAWH-----VDTPVIAITGSNGKS 124

Query: 127 TTTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTINPTAGI 186
           T T L   +  ++G    +GGNIG   L L  P  +  YV+E SS+Q++   ++   A  
Sbjct: 125 TVTDLSGVLANAAGVKAAVGGNIGVPALDLISPDVE-LYVLELSSFQLETTSSLKLKAAA 183

Query: 187 LLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLIADRIERAGVKVERISK 246
            LNL+ DH+DR+  M+ Y   K R+   + TA+V  DD+ +              +  + 
Sbjct: 184 FLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTF------------PDHAAH 231

Query: 247 RNVVSEGLYAEGSQILRAHGGTSSLLVDLDGIQ-----TLRGSHNAQNAAAAIAACLAVG 301
             VV+ G+       L  H G   L    + +      +L G HN  N    +A   + G
Sbjct: 232 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAG 291

Query: 302 VSEEEIRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSF---DRIYWIA 358
           V+       LKS+ GL HR Q V     + +VNDSKATN  +   ALS      ++Y + 
Sbjct: 292 VNFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLV 351

Query: 359 GGLPKAGGITSLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAE 418
           GG+ K    T L+P+   +            F     + +P   S     +++       
Sbjct: 352 GGVGKGADFTPLAPVLATLPVQLCC------FGVDGHQFMPLHPSARFYDSMESIIRSIR 405

Query: 419 KDATAGNVVMLSPACASFDQYKNFEIRGDSFVAQVA 454
               +G++V+LSPACASFDQ+KNF  RGD F AQ+A
Sbjct: 406 PQLKSGDMVLLSPACASFDQFKNFMARGDIF-AQLA 440