Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (495), Expect = 3e-54
 Identities = 148/458 (32%), Positives = 220/458 (48%), Gaps = 41/458 (8%)

Query: 14  LFGLGGSGLVTARALVAGGAAVVAFDDN--PDSVAKAQAE----GIATADLHTIDWSSFS 67
           + GLG +GL   R L   G   +  D    P  +    AE     + T            
Sbjct: 13  VLGLGATGLSVVRFLARKGIVPLVMDSRRQPPGMDVLSAEFPDVTLVTGGFDCRYLVQAQ 72

Query: 68  SFVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRVHAPDCPFIAITGTNGKST 127
           S +++PG+ +  P+   ++D+    G+EVIGD+ELF RE +  AP C  +AITG+NGKST
Sbjct: 73  SIIISPGIAVDTPEVRAAMDM----GIEVIGDVELFAREIQDMAP-C-VLAITGSNGKST 126

Query: 128 TTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTINPTAGIL 187
            T L+  + ++  +   +GGNIG   L L   K    +V+E SS+Q++   +++  AG  
Sbjct: 127 VTTLVGEMARADNKAVAVGGNIGVPALEL-LGKGAELFVLELSSFQLETTHSLHCIAGTC 185

Query: 188 LNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLIADRIERA---GVKVERI 244
           LN++ DH+DR+  ++ Y   K RL   S  ++   DD+ +  I D        G+ V  +
Sbjct: 186 LNISEDHMDRYTDLEAYRQAKLRLYPQSKLSVYNRDDAAT--IPDEPRNTVSFGLGVPEL 243

Query: 245 SKRNVVSEGLYAEGSQILRAHGGTSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAVGVSE 304
               ++   +Y   S+I+         L+D+     L GSHN  N  AA+A C A G+S 
Sbjct: 244 DDWGLMDGKIYHGASEIMN--------LLDV----ALIGSHNHANLLAAMALCEAAGISR 291

Query: 305 EEIRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSFDR----IYWIAGG 360
           E +    K F GL HR + V    ++ +VNDSKATN  A   AL+        I  IAGG
Sbjct: 292 EAMVKVAKEFTGLAHRCELVASHNSIAWVNDSKATNVGATVAALNGLAEHLGDIILIAGG 351

Query: 361 LPKAGGITSLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKD 420
             K      L      ++    +G    + A     A+      T+ +AV+ A A     
Sbjct: 352 DGKGADFEPLRGALGAVSHLITLGRDGDKIAVLKEGAIKV---ATMAEAVEKAKA----L 404

Query: 421 ATAGNVVMLSPACASFDQYKNFEIRGDSFVAQVAALEG 458
           A  G++V+LSPACAS D Y NF  RGD F A V  + G
Sbjct: 405 ANPGDIVLLSPACASLDMYTNFMARGDDFRANVERVYG 442