Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 465 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD from Phaeobacter inhibens DSM 17395

 Score =  361 bits (927), Expect = e-104
 Identities = 219/477 (45%), Positives = 282/477 (59%), Gaps = 31/477 (6%)

Query: 1   MIPVTSFRGKKVALFGLGGSGLVTARALVAGGAAVVAFDDNPDSVAKAQAEGIATADLHT 60
           MIPVT F G KVA+ GLG SG  TARAL  GGA  V +DDNP + A+A+ EG    DL  
Sbjct: 1   MIPVTGFEGAKVAVLGLGRSGFATARALREGGAEPVCWDDNPGARARAEVEGFVCRDLQK 60

Query: 61  ID-WSSFSSFVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIR-------ERRVHAP 112
              +   +S V++PG+P  +PKP+  +  A  AGV V  DI LF R       ER   AP
Sbjct: 61  AGAFDDIASLVVSPGIPHLYPKPNPVIHAALVAGVPVDNDIGLFFRSVATRGWERFDQAP 120

Query: 113 DCPFIAITGTNGKSTTTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSY 172
               +A+TG+NGKSTT AL+ HILQ +GR++QL GNIG  VL +DPP +    V+E SSY
Sbjct: 121 R--IVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLDIDPPGSGGIVVLELSSY 178

Query: 173 QIDLAPTINPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGT--AIVGVDDSHSTLI 230
           Q DLA  + P   +  NL+PDHLDRH  M  Y   K RL A  G   AI+GVD+     +
Sbjct: 179 QTDLARALTPDVAVFTNLSPDHLDRHAGMGGYFAAKRRLFAEGGPDRAIIGVDEDEGLYL 238

Query: 231 ADRIERAGV--KVERISKRNVVSEGLYAEGSQILRAHG-------GTSSLLVDLDGIQTL 281
           A ++  A    +V RIS     S+ L   G Q+    G       G  +  +DL  +Q L
Sbjct: 239 AGQLSEAASDDRVIRIS----ASQKLTGLGWQVFARKGFLSEYRKGRQAASIDLRQMQGL 294

Query: 282 RGSHNAQNAAAAIAACLAVGVSEEEIRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNA 341
            G+HN QNA AA AA  A+G++   I   L S+PGL HR Q +     V +VNDSKATN 
Sbjct: 295 PGAHNHQNACAAYAAARALGLAPRLIEDALASYPGLPHRSQTIATHAGVRYVNDSKATNL 354

Query: 342 DAAAPALSSFDRIYWIAGGLPKAGGITSLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYE 401
           D+A  ALS+FD I WI GGL K GG+ +L     ++ KAY+IG  AA FA  L   V  E
Sbjct: 355 DSAVKALSAFDNIRWICGGLEKDGGLEALRGQTGKVRKAYVIGREAAGFAMQLD--VEAE 412

Query: 402 ISGTLDKAVQHAAADAEKDATAGNVVMLSPACASFDQYKNFEIRGDSFVAQVAALEG 458
           +  T+ +AV  A+A+AE     G+ V+L+PA ASFDQY NFE RG+ F+A+VA L+G
Sbjct: 413 VCITMAEAVARASAEAE----TGDTVLLAPAAASFDQYDNFEQRGEDFIAEVAKLQG 465