Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (485), Expect = 4e-53
 Identities = 148/454 (32%), Positives = 215/454 (47%), Gaps = 37/454 (8%)

Query: 14  LFGLGGSGLVTARALVAGGAAVVAFD--DNPDSVAKAQAEG----IATADLHTIDWSSFS 67
           + GLG +GL   R L+  G   +  D  +NP        E     + T           S
Sbjct: 9   VLGLGATGLSVVRYLIKQGITPLVMDSRENPPGRETLSQEFPEVLLLTGGFDCRYLVQAS 68

Query: 68  SFVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRVHAPDCPFIAITGTNGKST 127
             V++PG+PL   +   +VD+    G++++GD+ELF R      P C  I ITG+NGKST
Sbjct: 69  QIVVSPGIPLDTAEVRAAVDM----GIDIVGDVELFARAL-ADRPAC-VIGITGSNGKST 122

Query: 128 TTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTINPTAGIL 187
            T L+  +   +G    +GGNIG  VL L     + F V+E SS+Q++   ++N  +   
Sbjct: 123 VTTLVGEMAAKAGLKVAVGGNIGVPVLDLLDGDHELF-VLELSSFQLETTSSLNCISATC 181

Query: 188 LNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLIADRIERAGVKVERISKR 247
           LN++ DH+DR+  ++ Y   K RL   +  AI   DD         + R    + + S  
Sbjct: 182 LNISEDHMDRYSDLESYRQAKLRLYDQTKLAIFNRDDL--------LTRPNEPMNQNSFG 233

Query: 248 NVVSEGLYAEGSQILRAHGGTSSLLVDLDGIQ-TLRGSHNAQNAAAAIAACLAVGVSEEE 306
             + EG     +  +  HG T  +     G Q +L GSHN  N   A+A   + GV +  
Sbjct: 234 LSLPEGDEWGVNHGVLVHGTTEYVA----GAQVSLVGSHNQANLLVAMALADSAGVDKAA 289

Query: 307 IRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSFD----RIYWIAGGLP 362
           +    K F GL HR + VG+   V++VNDSKATN  A   AL        +I  IAGG  
Sbjct: 290 MVEVAKQFKGLAHRCELVGKHQGVSYVNDSKATNVGATIAALQGLSDHEGQIILIAGGDG 349

Query: 363 KAGGITSLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKDAT 422
           K    ++L      + +   +G+     A     A+  E       ++Q A A A + A 
Sbjct: 350 KGADFSTLRGALLGVGQVITLGKDGDRIAEQFDGAIRVE-------SMQEAVAQAAQLAK 402

Query: 423 AGNVVMLSPACASFDQYKNFEIRGDSFVAQVAAL 456
            G++V+LSPACAS D Y NF  RGD F AQV AL
Sbjct: 403 PGDLVLLSPACASLDMYANFMARGDDFRAQVEAL 436