Pairwise Alignments

Query, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

Subject, 433 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  205 bits (521), Expect = 3e-57
 Identities = 158/459 (34%), Positives = 225/459 (49%), Gaps = 51/459 (11%)

Query: 9   GKKVALFGLGGSGLVTARALVAGGAAVVAFDDNPDSVAKAQAEGIATADLHTI----DWS 64
           G    + G G SG+  AR L A GA V   + +  +V    AE  A A +  +    D +
Sbjct: 14  GDIAVVVGTGRSGVAAARLLHAKGARVRVLERDAANVPATFAEWAAGAGVEIVCGAHDAA 73

Query: 65  SFSS---FVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRVHAPDCPFIAITG 121
            F+     V +PGV +   +P+    L    G EV+ ++EL  RE        P IA+TG
Sbjct: 74  HFADAAVVVPSPGVAVATLRPY----LPATGGPEVMAEMELAWRELSGE----PVIAVTG 125

Query: 122 TNGKSTTTALIAHILQSSGRDTQLGGNIGTAVLS--LDPPKAQRFYVVECSSYQIDLAPT 179
           T+GK+TT +L AH+L++ G    LGGNIGT +    L+  +A    V+E SS+Q+    T
Sbjct: 126 TSGKTTTVSLCAHMLRTQGLSVFLGGNIGTPLCEYVLEGKRAD-VLVIEISSFQLQTCST 184

Query: 180 INPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLIADRIERAGV 239
             P   +LLN+T +HLD H  MQ Y D K RL        + V       +A  ++R GV
Sbjct: 185 FRPRVAMLLNITANHLDYHADMQEYIDAKFRLFRCQDEDDLAVFGEG---LAPLVDRYGV 241

Query: 240 KVERISKRNVVSEGLYAEGSQILRAHGGTSSLLVDLDGIQTLRGSHNAQNAAAAIAACLA 299
           K  R++ R   +   +AE                       L G+HN  NA AA  A   
Sbjct: 242 KARRVTFR---ATDRFAESR---------------------LFGAHNRANAEAAWTAARE 277

Query: 300 VGVSEEEIRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSFDR-IYWIA 358
            GV+ E     + +F  + HR++ V  RG V +VNDSK T   A   AL +FDR +  +A
Sbjct: 278 FGVTLENALQAVATFAPMPHRLEQVAERGGVLYVNDSKCTTVSALRVALEAFDRPVLLLA 337

Query: 359 GGLPKAGGITSLSPLF-PRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADA 417
           GG  K G +  L PL   R+    L G +   F A   + VP     TL++AV+ AA+ A
Sbjct: 338 GGKFKGGDLEGLIPLVRERVRAVMLFGASREVFEAAWRDVVPMTWDATLEEAVRRAASAA 397

Query: 418 EKDATAGNVVMLSPACASFDQYKNFEIRGDSFVAQVAAL 456
            +    G VV+++PA ASFD ++N+  RGD F A V +L
Sbjct: 398 RQ----GEVVLMAPATASFDLFRNYGHRGDVFRAAVESL 432