Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

Subject, 475 a.a., UDP-N-acetylmuramate--alanine ligase from Herbaspirillum seropedicae SmR1

 Score =  379 bits (972), Expect = e-109
 Identities = 208/467 (44%), Positives = 289/467 (61%), Gaps = 25/467 (5%)

Query: 10  VHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQRLRDKGIEVFVGHTADNLGDAEV 69
           +HF+GIGG GMSGIAEVL NLG+ V GSD   +A  QRL   G  +  GH A N+  A+ 
Sbjct: 8   IHFVGIGGSGMSGIAEVLLNLGYGVSGSDLGSNAATQRLAQLGACIRYGHAAGNIEGADA 67

Query: 70  VVVSTAIKKNNPELIAAREKHLPIVRRAEMLAELMRFRNAIAIGGTHGKTTTTSMVATLL 129
           +V STA+K +NPE++AAR+KH+PIV RA ML ELMR +  IAI GTHGKTTTTS+VA++L
Sbjct: 68  IVTSTAVKGDNPEVLAARKKHIPIVPRAVMLGELMRLKKGIAIAGTHGKTTTTSLVASVL 127

Query: 130 EAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLD 189
             G LDPT + GG + + G NA++G GE++V EADESD +FL L   + VITNID +H++
Sbjct: 128 AQGGLDPTFVIGGRLTSAGANAKLGTGEFIVAEADESDASFLNLTPVIEVITNIDADHME 187

Query: 190 HYG-NFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVITYGENPQADVRF 248
            Y  +F  ++ AF +F + +PFYG  V+CLD P V+ ++  +  + ++TYG +  ADVR 
Sbjct: 188 TYNHDFARLKQAFVEFTQRLPFYGVAVLCLDDPHVREIMPMV-SKPILTYGFHEDADVRA 246

Query: 249 SNVR-IDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATAAIAVANRLGISEAD 307
            + + +DG      ++         ++   + L  PG HNV NA AAIA+A  L + +A 
Sbjct: 247 IDAKAVDGKMEFTVIQ-------DGYAPMQVSLNQPGMHNVQNACAAIAIARELDVDDAA 299

Query: 308 IKKGLASFAGVKRRFTLTGE----------ANGVQVFDDYGHHPVEIKAVLAAAREACKG 357
            +K L  F GV RRFT  GE          A    + DDYGHHPVE  A +AAAR A  G
Sbjct: 300 TQKALTEFNGVGRRFTRYGEVPLWDAEGKPAGHFTLVDDYGHHPVETAATIAAARGAYPG 359

Query: 358 -RIIAVHQPHRYSRLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVSAIKAA 416
            R++   QPHRY+R   LF+DF    +  D ++LA VY+AGE PI  A   +L  A++AA
Sbjct: 360 RRLVLAFQPHRYTRTRDLFEDFVKVLSSPDVLVLAEVYSAGEAPIVAADGRSLAHALRAA 419

Query: 417 GHRDARFLEKREDLASQVAAIANPGDFVVLLGAGNITQWAAALPSEL 463
           G  +  F++   D+   +  +   GD V+ +GAG+I    +A+P  L
Sbjct: 420 GKVEPVFVDDIGDMPETIRNVVRDGDVVMTMGAGSI----SAVPGRL 462