Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

Subject, 454 a.a., UDP-N-acetylmuramate--alanine ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  413 bits (1062), Expect = e-120
 Identities = 219/452 (48%), Positives = 291/452 (64%), Gaps = 9/452 (1%)

Query: 3   MPKAIGLVHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQRLRDKGIEVFVGHTAD 62
           M   +  +H +GIGG GMSGIAEVL NLG+ V GSD +DSA V+RLR  G E+F+GH A 
Sbjct: 1   MKNKVRTIHMVGIGGSGMSGIAEVLLNLGYAVHGSDMSDSAVVRRLRKIGAEIFIGHGAG 60

Query: 63  NLGDAEVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAELMRFRNAIAIGGTHGKTTTT 122
           N+ DAEV+V STA++ +NPE++AA EK +PI+ RAEMLAELMR R  IAI GTHGKTTTT
Sbjct: 61  NVSDAEVLVKSTAVRDDNPEVLAAVEKGIPIIPRAEMLAELMRLRTGIAIAGTHGKTTTT 120

Query: 123 SMVATLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPADVAVITN 182
           S+ A + +    DPTVI GG +NAYG NAR+GEGE+++ EADESDG+FL L   V V+TN
Sbjct: 121 SLTAAIFDVAGKDPTVIIGGRLNAYGANARLGEGEYLIAEADESDGSFLCLFPIVNVVTN 180

Query: 183 IDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVITYGENP 242
           +D +H+D Y     +  AF  F+  VPFYG  V+C D P V+ L+ +++ R+V+TYG   
Sbjct: 181 VDMDHVDFYAGQKEIDEAFVTFMNKVPFYGANVVCGDDPGVRRLLPQVK-RRVVTYGFGK 239

Query: 243 QADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATAAIAVANRLG 302
              +R + V      S+F V +R  R G++       L  PGRHN+ NA AAI VA   G
Sbjct: 240 DNALR-AEVTSCAETSVFTVFLRGGRLGEVH------LGQPGRHNILNALAAIGVALEAG 292

Query: 303 ISEADIKKGLASFAGVKRRFTLTGEANGVQVFDDYGHHPVEIKAVLAAAREACKG-RIIA 361
           IS     +GLA F GV RRF   GE +GV V DDYGHHPVEI A LA AR      R++ 
Sbjct: 293 ISPEHCIEGLARFGGVGRRFERRGERDGVTVVDDYGHHPVEIAATLATARSVYPDRRLVV 352

Query: 362 VHQPHRYSRLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVSAIKAAGHRDA 421
           V QPHR+SR  +LF +F   F   D +LL  +Y A E PI G S ++L   I+   + D 
Sbjct: 353 VFQPHRFSRTQALFGEFCKVFEPVDKLLLTEIYPASEKPIPGVSGQSLAQGIRQVSNTDV 412

Query: 422 RFLEKREDLASQVAAIANPGDFVVLLGAGNIT 453
            + +  +++ + +  +  PGD ++ LGAG++T
Sbjct: 413 TYYQSFDEILAALPGVLRPGDVLLTLGAGSVT 444