Pairwise Alignments

Query, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  103 bits (256), Expect = 6e-27
 Identities = 75/183 (40%), Positives = 95/183 (51%), Gaps = 12/183 (6%)

Query: 88  LNAREVQILVQSHERFLHLSHTDALTGLSNR------LGL-YAACAELGSDYCVAFLDID 140
           +N R++Q      +R   LS TD LTGL NR      L L YA      S   +   DID
Sbjct: 139 VNRRQLQAANAELQR---LSSTDRLTGLYNRGHWEEMLRLDYARHRRYDSQAALVMFDID 195

Query: 141 HFKAVNDGYSHLVGDLVIASVARRIKEHFDPPAHVARLGGEEFVV-VQETSPLAFLQMCE 199
           HFKA+ND Y H VGD VI  VA  I+E+        R GGEEFVV + +T     L   E
Sbjct: 196 HFKAINDSYGHQVGDSVIQQVADLIRENLRDSDVAGRYGGEEFVVLLPDTDKQGALIFAE 255

Query: 200 RVRAAIETTPVAYQDLRITVTISIGVA-FRGDAEIFDKVMHNADLALYRAKGGGRNRVCM 258
           R+R A+E   V ++  RI  TIS+GVA          +++  AD ALY +K  GRNRV +
Sbjct: 256 RLRQAVEAREVRHEQYRIRFTISLGVADLSMPTTSHAQLIEWADSALYVSKACGRNRVTL 315

Query: 259 SGH 261
             H
Sbjct: 316 HEH 318