Pairwise Alignments

Query, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (253), Expect = 4e-26
 Identities = 65/177 (36%), Positives = 90/177 (50%), Gaps = 7/177 (3%)

Query: 90  AREVQILVQSHERFLHLSHTDALTGLSNRLGL-------YAACAELGSDYCVAFLDIDHF 142
           A + Q L    E+F  LS  D LTGL+NR          ++          +A LDIDHF
Sbjct: 790 ALQTQKLRLQAEKFERLSKEDDLTGLANRRAFDMYLKQAFSRLQNPDQQVSIALLDIDHF 849

Query: 143 KAVNDGYSHLVGDLVIASVARRIKEHFDPPAHVARLGGEEFVVVQETSPLAFLQMCERVR 202
           K +ND YSH++GD  I +V++ +  +      VAR GGEEF ++    P       E++R
Sbjct: 850 KQINDRYSHIIGDQAIVAVSQELLGYVGDKTRVARWGGEEFTILYVGDPKQAWGYFEKLR 909

Query: 203 AAIETTPVAYQDLRITVTISIGVAFRGDAEIFDKVMHNADLALYRAKGGGRNRVCMS 259
             IE   ++     + VT+SIG A    AE ++ V+  AD AL  AK  GRNRV  S
Sbjct: 910 CKIEQVDLSAVAPGLNVTVSIGFADAQQAESYETVLKLADHALLTAKKLGRNRVVKS 966