Pairwise Alignments

Query, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 11/174 (6%)

Query: 96  LVQSHERFLHLSHTDALTGLSNRLGLYAACAELG-------SDYCVAFLDIDHFKAVNDG 148
           L +++++    +  D+LTG+ NR          G       +   +  +DID FKA+ND 
Sbjct: 442 LNEANQKLTEQNTVDSLTGVKNRAAFEKRLQAEGRLSRRQQTPLAILMIDIDRFKAINDT 501

Query: 149 YSHLVGDLVIASVARRIKEHFDPPAH-VARLGGEEF-VVVQETSPLAFLQMCERVRAAIE 206
           Y HL GD  + ++A+ +KE    P+  V+R GGEEF +++  TS    LQ+ E +R+ + 
Sbjct: 502 YGHLAGDQALKTIAQALKEKLRRPSDLVSRFGGEEFAMILPNTSCDGALQVAELMRSTVS 561

Query: 207 TTPVAYQDLRITVTISIGVAFR--GDAEIFDKVMHNADLALYRAKGGGRNRVCM 258
             P+A+ +  I +TISIG+      D +    ++  AD ALYRAK  GRNRVC+
Sbjct: 562 ELPLAWGEQAIPLTISIGICAEVIVDDQHTQLLVDQADKALYRAKHEGRNRVCV 615