Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 37/323 (11%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALE-GEGYKVTRVDVGRDV--------------AAV 50
           + +L GG SSE  +SL S N     LE    + V RV++ ++               +A 
Sbjct: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65

Query: 51  LDELRP----DVAFNALHGPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAA 106
           L+  +     D     +HG  GE G IQ +LE   IPY   G  ASA + +K  +K    
Sbjct: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125

Query: 107 AAGIPVAGERVMNRFDFTSEHPLQPPY------VVKPVREGSSFGVVIVKEDQSHPPQIL 160
           A  IP      + +   +S    +  +       VK  R+GSS G   V  +    P I 
Sbjct: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAI- 184

Query: 161 TSSEWPFGNQVMVERYIHGRELTCGVLDGEA-LGVT---EVVPLGHNFYDYDAKYAAGGS 216
             + + F  QV+VE+ +  REL     +    L ++   EV+     FY Y+ KY+A   
Sbjct: 185 -EAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSH 243

Query: 217 KHVI--PAGISPKIYQKIQTLAVMAHQAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQP 274
              +     ++ K  + IQT A      +  R +SR DF      +++G++   EVNT P
Sbjct: 244 ARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFF----LTQEGQIYLNEVNTFP 299

Query: 275 GMTPTSLVPEMAAHAGRSFGDLV 297
           GMTP S+ P+M  H G  F + +
Sbjct: 300 GMTPISMFPKMLEHNGHRFSEFL 322