Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 306 a.a., D-alanine--D-alanine ligase Ddl from Phaeobacter inhibens DSM 17395

 Score =  322 bits (826), Expect = 5e-93
 Identities = 169/303 (55%), Positives = 216/303 (71%), Gaps = 7/303 (2%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAVLDELRPDVAFNALHG 65
           VAVL+GG S+ER VSLS+G  CA AL  EGY+VT +D G D+AA L   RPDV FNALHG
Sbjct: 11  VAVLMGGPSAEREVSLSTGRECATALRDEGYQVTELDAGPDLAARLQADRPDVVFNALHG 70

Query: 66  PFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFDFTS 125
            +GEDG +QG+LE+L IPYTHSGVLASALAMDK +AK +  AAG+PV    + ++ +  +
Sbjct: 71  RWGEDGCVQGLLEWLGIPYTHSGVLASALAMDKQRAKSIYRAAGLPVVESGIYSKAEVMA 130

Query: 126 EHPLQPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWPFGNQVMVERYIHGRELTCG 185
            H + PPYVVKP  EGSS GV +V E  + PPQ+  S + P  ++VMVE +  GRELT  
Sbjct: 131 GHVMAPPYVVKPNNEGSSVGVYLVNEVANGPPQL--SQDMP--DEVMVESFAPGRELTTT 186

Query: 186 VLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAGISPKIYQKIQTLAVMAHQAIGC 245
           VL  + L VT+++  G  +YDYDAKY  GGS+HV+PA +  +I+      AV AH A+GC
Sbjct: 187 VLGDKPLTVTDILTDG--WYDYDAKYKPGGSRHVLPADVPEEIFALCLDYAVKAHDALGC 244

Query: 246 RGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGDLVSWMVEDAS 305
           RG+SR+DFR+D+    +G +I LE NTQPGMTPTSL PE A H+G +FG L SW+VEDA+
Sbjct: 245 RGISRTDFRWDEARGAEG-LILLETNTQPGMTPTSLTPEQAEHSGMTFGQLCSWLVEDAT 303

Query: 306 CLR 308
           C R
Sbjct: 304 CPR 306