Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 334 a.a., D-alanine--D-alanine ligase from Herbaspirillum seropedicae SmR1

 Score =  163 bits (412), Expect = 6e-45
 Identities = 114/313 (36%), Positives = 158/313 (50%), Gaps = 20/313 (6%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAVLDELRPDVAFNALHG 65
           V VL GG S+ER VS+ SGN    AL  +G      D        L   + D  F ALHG
Sbjct: 13  VGVLFGGRSAEREVSMMSGNGVLQALRSKGVDAHPFDPAERSLGELQAEQFDRVFIALHG 72

Query: 66  PFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFDFTS 125
            +GEDGT+QG LE + +PYT  GV++S++AMDK   K++  + G+P      ++    T 
Sbjct: 73  RYGEDGTLQGALEQMGLPYTGPGVMSSSIAMDKVMTKRIWLSHGLPTPRFLTLDAQATTR 132

Query: 126 EH------PLQPPYVVKPVREGSSFGVVIVK--EDQSHPPQILTSSEWPFGNQVMVERYI 177
           E        L  P ++K   EGS+ G+  V    D      +       +   V+ E +I
Sbjct: 133 EQLRLVPDTLGLPLMLKAPHEGSTIGIAKVNGYSDMQEGFDLCAR----YDKVVLAEEFI 188

Query: 178 HGRELTCGVLD----GEALGVTEV-VPLGHNFYDYDAKYAAGGSKHVIPAGISPKIYQKI 232
            GRELT  VL       AL V E+  P G+  YDY  KY    +K++ PA +  ++ + +
Sbjct: 189 RGRELTVPVLGTGSAARALPVIEIRAPEGN--YDYQNKYFTDDTKYLCPAPLDEELTRHL 246

Query: 233 QTLAVMAHQAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRS 292
           Q LAV A  A+GCRG SR DF   +      E   LE+NT PGMT  SLVP  A   G S
Sbjct: 247 QNLAVQAFNALGCRGWSRVDFMLRE-VDGKAEPYLLEINTSPGMTGHSLVPMAAKAVGMS 305

Query: 293 FGDLVSWMVEDAS 305
           + DL   +++ A+
Sbjct: 306 YEDLCCEILQMAA 318