Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 303 a.a., D-alanine--D-alanine ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  157 bits (396), Expect = 4e-43
 Identities = 107/299 (35%), Positives = 154/299 (51%), Gaps = 8/299 (2%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAVLDELRP-DVAFNALH 64
           V ++ GG+SSER VSL+       AL   G+ VT  D    +  +L+     D AF  LH
Sbjct: 3   VLLIAGGWSSERDVSLAGARGIEKALCALGHDVTWFDPATSLDGLLEAASSHDFAFINLH 62

Query: 65  GPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFDFT 124
           G  GEDG +Q +L+    PY  SG   S LA++KA +K++    GI       +      
Sbjct: 63  GSPGEDGLVQAMLDTAGCPYQGSGPAGSFLALNKAVSKQLLRRHGILTPDWAFLAARPAA 122

Query: 125 SEHP-LQPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWPFGNQVMVERYIHGRELT 183
              P L  P  VKP   GSS  +  V + +   P +   + +    + +VE  I G E+T
Sbjct: 123 DWEPGLGYPLFVKPNTGGSSLCLSRVTQPEGLAPAL--EAVFAHCGEAIVEPAIPGVEVT 180

Query: 184 CGVLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAGISPKIYQKIQTLAVMAHQAI 243
           CGVL   AL    + P    F+DY +KY  GG+  + PA +  ++   +Q + + AH+ +
Sbjct: 181 CGVLGDTALPPILIRPAEGAFFDYTSKYTPGGATELCPAPLPAEVTAHVQDVTLRAHRLL 240

Query: 244 GCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGDLVSWMVE 302
           G RG SR+D+   D    DG +  LEVNT PGMTPTSLVP+ AA  G  F  L++ ++E
Sbjct: 241 GLRGYSRADYILRD----DGALFLLEVNTLPGMTPTSLVPQEAAAIGLDFPALIARLIE 295