Pairwise Alignments

Query, 308 a.a., D-alanylalanine synthetase from Agrobacterium fabrum C58

Subject, 308 a.a., D-alanine--D-alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  314 bits (804), Expect = 2e-90
 Identities = 164/303 (54%), Positives = 207/303 (68%), Gaps = 7/303 (2%)

Query: 6   VAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDVAAVLDELRPDVAFNALHG 65
           VA+++GG SSER VSLSSG  C  AL  EG++V  +D G D+AA L++LRPDV FNALHG
Sbjct: 13  VAMMMGGTSSERAVSLSSGRECGAALRAEGFEVIDLDAGPDLAARLEDLRPDVVFNALHG 72

Query: 66  PFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVAGERVMNRFDFTS 125
            +GEDG +QG+LE+L IPYTHSGVLASALAMDK + K   AAAG+P+A   +  R    +
Sbjct: 73  RWGEDGCVQGLLEWLRIPYTHSGVLASALAMDKERTKAAYAAAGLPIATSGLFTRAQIAA 132

Query: 126 EHPLQPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWPFGNQVMVERYIHGRELTCG 185
            H + PPYV+KP  EGSS GV +V E     P++  + + P  + +MVE ++ GRELT  
Sbjct: 133 RHVMPPPYVIKPYNEGSSVGVYLVPEGAEAAPEL--ADDLP--DTLMVEAFVPGRELTVT 188

Query: 186 VLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAGISPKIYQKIQTLAVMAHQAIGC 245
           V    AL VT++V  G  +YDYDAKY  GGS+HV+PA +   +Y      A  AH+ +GC
Sbjct: 189 VQGDRALCVTDIVTEG--WYDYDAKYVPGGSRHVLPAEVPGDVYDACMAHAETAHRVLGC 246

Query: 246 RGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGDLVSWMVEDAS 305
           RG+SR+DFR+D R S DG  + LE NTQPGMTPTSL PE A H G  FG L  W+VEDAS
Sbjct: 247 RGISRTDFRWDPRRSLDGLAL-LETNTQPGMTPTSLTPEQAQHVGLGFGALCRWIVEDAS 305

Query: 306 CLR 308
           C R
Sbjct: 306 CDR 308