Pairwise Alignments

Query, 557 a.a., DNA repair protein RecN from Agrobacterium fabrum C58

Subject, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

 Score =  313 bits (801), Expect = 1e-89
 Identities = 186/561 (33%), Positives = 295/561 (52%), Gaps = 14/561 (2%)

Query: 1   MLVQLSIRDIVLIERLDLSFEAGLSVLTGETGAGKSILLDSLSLALGGRGDGGLVRHGED 60
           ML  LSI +  +++ L L    G++ +TGETGAGKSI +D+L L LGGR +  +VR GED
Sbjct: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60

Query: 61  KGQVTAAFEVPNDHPTRLLLRENGLDDDGDLIFRRVQSADGRTKAYVNDQAVSVQMMRQL 120
           K +V+AAF + N+      L +N L +  + I RR+ + DGR+KA++N   V +  ++ L
Sbjct: 61  KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTL 120

Query: 121 GQMLVEIHGQHDDRALVDTDAHRTLLDAFAGLSDEARSVQGLYRTWKDADRALKTHRAKV 180
           GQ+L+ +HGQH  + L+  +   ++LD +AG +D  ++ +  Y+ W+ A   LK  R   
Sbjct: 121 GQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENS 180

Query: 181 EAAAREADYLRSSVEELETLSPRDGEEDELAERRAVMQKSERIAGDIAEASEFLNGNASP 240
           +    +   L   ++EL  L+  + E  EL + +  +  S  +A +   A E LN     
Sbjct: 181 QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEE- 239

Query: 241 VPVIASMMRRLERKSH------EAPGLLEDTVQLLDAALDSLSNAQMEVEAALRRTEFDP 294
                + +  L+  SH      E    L     ++  AL  L     E+   L   + DP
Sbjct: 240 ----VNALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDP 295

Query: 295 RELERVEERLFALRAAGRKYNVAVPDLPALAEKMVTDLADLDAGEEKLGKLEANLGIVKA 354
             +  VEER   + +  RK++V   +L    + ++  +A LD  +EK+  L + + ++  
Sbjct: 296 ERMAYVEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQ 355

Query: 355 DFDRAARSLSEKRRNAAEALSGAVMAELPALKLERARFTVEVTSDPEQATADGIDTVEFH 414
            F  AA  L + R   A+ L   +   +  L +E+A+F +EV  D   ++  G D V F 
Sbjct: 356 TFVAAADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAVTFL 415

Query: 415 VQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQ 474
           V TNPG    PI KVASGGELSR  LA++V  A +   P+L+FDE+D G+ G  A  +G+
Sbjct: 416 VSTNPGQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGK 475

Query: 475 RLRRLSKTVQVLSVTHAPQVAARAATHLLISKGPSGDGSERIATRVATMEPNHRTEEIAR 534
            LR+L ++ QVL VTH PQVA      L ++K      +E   T++  ++   R  E+AR
Sbjct: 476 LLRKLGESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTE---TQMLKLDQEQRIAELAR 532

Query: 535 MLAGASVTDEARAAAARLLAA 555
           +L G+ +T+   A A  LL A
Sbjct: 533 LLGGSQITESTLANAKELLIA 553