Pairwise Alignments

Query, 557 a.a., DNA repair protein RecN from Agrobacterium fabrum C58

Subject, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

 Score = 43.5 bits (101), Expect = 5e-08
 Identities = 24/84 (28%), Positives = 41/84 (48%)

Query: 415  VQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQ 474
            +  +P  +    + V SGGE S   LA   A+     AP  V DE+D  +    A  IG+
Sbjct: 1086 IDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGE 1145

Query: 475  RLRRLSKTVQVLSVTHAPQVAARA 498
             ++  SK  Q + ++H  Q+ +++
Sbjct: 1146 MIKNASKDSQFIVISHREQMISKS 1169



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 28/158 (17%), Positives = 75/158 (47%), Gaps = 7/158 (4%)

Query: 208 DELAERRAVMQKSERIAGDIAEASEFLNGNASPVPVIASMMRRLERKSHEAPGLLEDTVQ 267
           DE++      +K E+   ++ +A EF+      +  + + + +L+++  +A   ++ T +
Sbjct: 180 DEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEE 239

Query: 268 LLDAALDSLSNAQME-VEAALRRTEFDPRELERVEERLFALRAAGRKYNVAVPDLPALAE 326
            L A    L++ ++E +   L +T+    E+E ++E          +Y+    D+    +
Sbjct: 240 -LKATKYILTSKKIEFLNGILEKTK---EEIEALKEMKVCFLKEISEYDAKSNDIRNRLQ 295

Query: 327 KMVTDLADLDAGEEKLGKLEANLGIVKADFDRAARSLS 364
            ++ +L   + G E++ +L  ++  ++   D   +SL+
Sbjct: 296 NLINELN--EKGNEEIMELHKSIKEMEVTVDNDKKSLN 331



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 186 EADYLRSSVEELETLSPRDGEEDELAERRAVMQKSERIAGDIAEASEFLNGNASPVPVIA 245
           E DYL  S EELE        E+   +      + +RI+ +IA      + ++  + VI 
Sbjct: 769 ELDYLEGSKEELERKI-----EEFTKKISGFTSQRDRISEEIASFEN--SEHSKRIKVID 821

Query: 246 SMMRRLERKSHEAPG-LLEDTVQLLDAALDSLSNAQMEV-EAALRRTEFDPR---ELERV 300
             +   E+K +E    +  D V + +  +  +S     + E + +RT  +         V
Sbjct: 822 ENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKELSEKRTILEQNIQFYKNNV 881

Query: 301 EERLFALRAAGRKYNVAVPDLPALAEK 327
           E+    L+    +Y     DL  L EK
Sbjct: 882 EKNFEILKNKKERYEDLTKDLRELTEK 908