Pairwise Alignments

Query, 724 a.a., DNA ligase from Agrobacterium fabrum C58

Subject, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

 Score =  556 bits (1433), Expect = e-162
 Identities = 319/705 (45%), Positives = 431/705 (61%), Gaps = 50/705 (7%)

Query: 15  EASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRADSPSKKV 74
           + +  L  L   L  H   Y+ +DAP I DA+YD L R    +EAA P L+ +DSPS +V
Sbjct: 3   DVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRV 62

Query: 75  GFTPLPTFAPIVHARPMLSLDNTFSEEDLRDFVSSVYRFLGHLPD-DSIAFTAEPKIDGL 133
           G  PL  F  +VH  PMLSLDN F + +L  F     R    +P     AF  EPK+DGL
Sbjct: 63  GGRPLDAFESVVHEIPMLSLDNAFDDGELESFYR---RMTDRIPAVQHSAFCCEPKLDGL 119

Query: 134 SMSIRYENRKLKTAATRGDGTTGENVTANIRTIKEIPNELP-ADAPDVVEVRGEVYMAKS 192
           ++S+ YEN  L  AATRGDGTTGEN+T N+RTIK IP  L  AD P  +EVRGEV+M K+
Sbjct: 120 AVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKA 179

Query: 193 DFLALNAQMEADGKQTYVNPRNTASGSLRQLDANVTAKRKLRFFAYALGEVSNGGQPARI 252
            F ALNA+    G++ +VNPRN A+GSLRQLD+ +TA+R L F+AY++G +  G     +
Sbjct: 180 GFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGG----EL 235

Query: 253 ADTQYGIVEKFREWGFPVNPLMKRFTSAQQLLEHYNEIGVARPDLDYDIDGVVYKVDRLD 312
           A + Y    + + WG P+ P  K  TS  ++   Y +I   R  L Y+IDGVV KVD + 
Sbjct: 236 ATSHYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQ 295

Query: 313 LQERLGFRSRSPRWATAHKFPAEQAFTTVENIEIQVGRTGALTPVARLTPITVGGVVVTN 372
           LQERLGF +R+PRWA A+KFPA++  T + ++E QVGRTGA+TPVA+L P+ VGGV V+N
Sbjct: 296 LQERLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSN 355

Query: 373 ATLHNADYIEGIGNSGERIRPEDHDIRIGDTVIVQRAGDVIPQVLDVLLEKRAAGAAKYV 432
           ATLHNAD IE +G            + +GDTV+++RAGDVIPQ++ V+LE+R   A   V
Sbjct: 356 ATLHNADEIERLG------------VMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIV 403

Query: 433 FPEKCPVCGSHAVRERNEKTGKLDSVTRCTGGFVCRAQAVEHLKHFVSRNAFDIEGLGTK 492
           FP +CPVC S   R   E      +V RC+GG +C+AQ  E LKHFVSR A D+EGLG K
Sbjct: 404 FPTRCPVCQSDVERVEGE------AVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDK 457

Query: 493 QIDFFFESDDPALSIKTAPDIFTLKARQEASHLTKLENIDGFGKVSVKKLFDAIDARRAI 552
            I+   + +     + T  D+F L+    A  LT LE +   G  S + + DA++  +  
Sbjct: 458 VIEQLVDRE----MVSTPADLFRLR----AGELTILERM---GPKSAQNVIDALNKAKQT 506

Query: 553 DLHRLIFALGIRHVGETTAKLLARSYGTYEHFEKAMKAAADPASDAWAELNSIDGIGEVV 612
            L + ++ALGIR VGE TA  LA+ + + E  ++A          +  +   +  +G VV
Sbjct: 507 TLPKFLYALGIREVGEATALNLAQHFLSLEAIQQA----------SLEQFIEVPDVGVVV 556

Query: 613 ARAIIEFYKEPRNLDVIDRLIRE--LQPKEAEKPSTEGSPVAGKTVVFTGSLEKFTRDEA 670
           A  +  F+ + RN  VI+ L+ +    P     P    S +AGK VV TGS  + +R++A
Sbjct: 557 ASHLQAFFAQDRNQQVINELLEQGITWPALTAAPVAVDSALAGKIVVLTGSFTQLSRNDA 616

Query: 671 KARAESLGAKVAGSVSKKTDILVAGPGAGSKLAKATELGVQTMDE 715
           KA  ++LGAKV GSVSK TD++ AG  AGSKLAKATELG+Q  DE
Sbjct: 617 KAALQALGAKVTGSVSKNTDMVFAGEAAGSKLAKATELGIQVFDE 661