Pairwise Alignments

Query, 724 a.a., DNA ligase from Agrobacterium fabrum C58

Subject, 796 a.a., DNA ligase, NAD-dependent from Dechlorosoma suillum PS

 Score =  460 bits (1184), Expect = e-133
 Identities = 283/652 (43%), Positives = 370/652 (56%), Gaps = 58/652 (8%)

Query: 16  ASSELAFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRADSPSKKVG 75
           A +  A L AEL  H+  Y+  DAP + DA+YD L R   A+EA +P L+ ADSP+++VG
Sbjct: 7   ARARAAALRAELESHNHAYYVLDAPTVPDAEYDRLFRELQALEAEYPELLSADSPTQRVG 66

Query: 76  FTPLPTFAPIVHARPMLSLDNTFSEEDLR--DFVSSVYRFL----GHLPDDSIAFTAEPK 129
             PL +F  + HA PMLS+      E     +F + V + L    G  P   + + AE K
Sbjct: 67  GKPLDSFPSVSHAVPMLSIQTETDTEPSGAFNFDARVRKELELEEGAAP---VEYAAELK 123

Query: 130 IDGLSMSIRYENRKLKTAATRGDGTTGENVTANIRTIKEIPNELPADA---PDVVEVRGE 186
            DGL++S+RYE+  L   ATRGDG +GE+VT N+RT++ IP  L   A   P ++EVRGE
Sbjct: 124 FDGLAVSLRYEHGVLVQGATRGDGASGEDVTQNLRTVRSIPLRLQGPAASLPPLLEVRGE 183

Query: 187 VYMAKSDFLALNAQMEADGKQTYVNPRNTASGSLRQLDANVTAKRKLRFFAYALGEVSNG 246
           VYM + D    N +  A G +T VNPRN A+GS+RQLD  + A R L FFAY +G VS  
Sbjct: 184 VYMRRDDLARYNEKALARGDKTLVNPRNGAAGSIRQLDPAIAASRPLNFFAYGIGAVSGW 243

Query: 247 GQPARIADTQYGIVEKFREWGFPVNPLMKRFTSAQQLLEHYNEIGVARPDLDYDIDGVVY 306
             PA    T  G+++    +G PV         A  L + +  +G  R  L +DIDGVVY
Sbjct: 244 TLPA----THAGLLDALAAFGLPVCQHRDVVRGAAGLADFHRRMGALRDSLPFDIDGVVY 299

Query: 307 KVDRLDLQERLGFRSRSPRWATAHKFPAEQAFTTVENIEIQVGRTGALTPVARLTPITVG 366
           KV+ L+LQ RLGFRSR PRWA AHK+PA++A T VE I+IQVGRTGALTPVARL P+ VG
Sbjct: 300 KVNSLELQARLGFRSREPRWAVAHKYPAQEALTVVEAIDIQVGRTGALTPVARLQPVFVG 359

Query: 367 GVVVTNATLHNADYIEGIGNSGERIRPEDHDIRIGDTVIVQRAGDVIPQVLDVLLEKRAA 426
           GV VTNATLHN D +   G            +  GDTVIV+RAGDVIP+V+ V+ E+R A
Sbjct: 360 GVTVTNATLHNEDEMARKGG-----------LCTGDTVIVRRAGDVIPEVVGVVAERRPA 408

Query: 427 GAAKYVFPEKCPVCGSHAVRERNEKTGKLDSVTRCTGGFVCRAQAVEHLKHFVSRNAFDI 486
           GA  +  P  CPVCGSH V+E  E      +V RC+GGF CRAQ ++ + HF  R   DI
Sbjct: 409 GATPFQMPRSCPVCGSHVVKEEGE------AVARCSGGFACRAQRIQAILHFAGRRMMDI 462

Query: 487 EGLGTKQIDFFFESDDPALSIKTAPDIFTLKARQEASHLTKLENIDGFGKVSVKK----- 541
           EGLG + ++   E D     I    D++ L            +  DG    +VK+     
Sbjct: 463 EGLGERYVERLVEFD----LIHGVADLYRLTLADLLEMKRLADERDGVTPETVKQGQIAT 518

Query: 542 -----LFDAIDARRAIDLHRLIFALGIRHVGETTAKLLARSYGTYEHFEKAMKAAADPAS 596
                L   I A +   L RL+FALGIRHVGE+TAK LA   G+     +A      PA 
Sbjct: 519 RWAENLLAGIAASKTPPLARLLFALGIRHVGESTAKTLADWLGSLAVVRRA------PA- 571

Query: 597 DAWAELNSIDGIGEVVARAIIEFYKEPRNLDVIDRLIRE-LQPKEAEKPSTE 647
                L ++  IG  VA AI +F+ EP N   +D L+   + P +   PS E
Sbjct: 572 ---PLLAALPDIGATVATAIADFFAEPHNAAAVDALLAAGVAPADEHAPSPE 620



 Score = 83.6 bits (205), Expect = 4e-20
 Identities = 56/117 (47%), Positives = 70/117 (59%), Gaps = 10/117 (8%)

Query: 612 VARAIIEFYKEPRN---LDVIDRLIRELQ---PKEAEKPSTEGSPVAGKTVVFTGSLEKF 665
           VA A++ + +E  N   L  +  L REL    P +A  P     P+AG T V TG+L   
Sbjct: 674 VATAVLAWLEEEGNRARLTALAALRRELLAALPAQALGPR----PLAGLTFVLTGTLPTL 729

Query: 666 TRDEAKARAESLGAKVAGSVSKKTDILVAGPGAGSKLAKATELGVQTMDEDEWLALI 722
            RDEAKAR E+ G KV+GSVSKKTD +VAG  AGSKL  A +LGV  +DE   L L+
Sbjct: 730 KRDEAKARIEAQGGKVSGSVSKKTDYVVAGEEAGSKLENALKLGVPVLDETALLNLL 786