Pairwise Alignments

Query, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 300 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 29/291 (9%)

Query: 7   AMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPREWAVWR 66
           A   AL ++WG ++  I + V+  PP+ +  +R  LA   +    R  G   P  WA W+
Sbjct: 13  AAFFALYVIWGSTYLVIRIGVEHWPPLLLAGIRFVLAGSLMYGFLRWRGAPAPT-WAQWK 71

Query: 67  AFFGMGLLNNIIPF---CLIVWGQTQIASGLASILNATTPLFTVIVAHFLTADEKMTGNK 123
           A   +G+L  ++ F    + V   T +ASG+A++  AT PLFT++  +F  A  + T  +
Sbjct: 72  AGAIIGVL--LLSFGNGAVSVAEHTGVASGVAALAVATVPLFTLLCGYFWGA--RNTRLE 127

Query: 124 LAGVLIGFVGVATMIGPAAFGGSSGLWGQIAILGAAISYSFAGIFGRRFKAMGVPPLMTA 183
            AG+++G +G+A M+   +   SS L G   ++ AA S++F  +  +         L   
Sbjct: 128 WAGIVLGLIGIA-MLNLGSNLQSSPL-GATLLVFAAASWAFGSVLSKH--------LPLP 177

Query: 184 TGQISSSTLMLIPAALLI-----DKPWTLAMPGLGTWGALIGIALLSTALA---YLIFFR 235
            G ++S+  MLI   +L+           +MP L  W AL  +    + +A   Y+   +
Sbjct: 178 AGAMASAVEMLIGGVVLLIGSVASGEHLDSMPPLEGWFALAYLTCFGSIVAFNAYMYLLK 237

Query: 236 ILASAGATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGLAAI 286
            +  A AT+ A V    P  A+LLG +  GE +  +    M +I + +  I
Sbjct: 238 HVRPAAATSYAYVN---PAVAVLLGIVFAGETIGAEESVAMLVIISAVVLI 285