Pairwise Alignments

Query, 303 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 314 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 92.8 bits (229), Expect = 9e-24
 Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 19/294 (6%)

Query: 2   DAREWAMLIALSLLWGGSFFFIGVAVKELPPVTIVTLRVSLAAVALLVVCRIMGLRLPRE 61
           D   +  L  ++++WGG+F    +    L P+   +LR  LA++ALL    + G+ L R 
Sbjct: 13  DLPVYLKLAMVTMIWGGTFVAGRILSDALAPMFAASLRFLLASIALLAFLALAGIPLARP 72

Query: 62  WA------VWRAFFGMGLLNNIIPFCLIVWGQTQIASGLASILNATTPLFTVIVAHFLTA 115
                       FFG+   N     C   +G   I +  AS++ A  P    + + +L  
Sbjct: 73  SVKQGLHLAALGFFGIFFYN----LCFF-YGLQYINASRASLIVALNPAVIGLASWWLFK 127

Query: 116 DEKMTGNKLAGVLIGFVGVATMI---GPAAFGGSSGLW-GQIAILGAAISYSFAGIFGRR 171
            E+++  K+AG+++   G   +I    P+   G++  W G + I G  + +    +F RR
Sbjct: 128 -ERLSRLKVAGIVLCIGGAGLVIVSRDPSLLQGAAQGWIGDLLIFGCVLGWGIYSLFSRR 186

Query: 172 FKAMGVPPLMTATGQISSSTLMLIPAALLIDKPWTLAMPGLGT--WGALIGIALLSTALA 229
                + PL T T  I   TLML  A     +    A+  L    W +L+ + +L +ALA
Sbjct: 187 LND-SLGPLQTVTWSILLGTLMLWLACAAAGEIRVEALRALDLEQWLSLLYLGVLGSALA 245

Query: 230 YLIFFRILASAGATNLALVTFLIPVSAILLGSLILGEQLEIKHFAGMAMIAAGL 283
           Y+ ++  +   GAT   +   L P++A+LLG+L+L E+L      G  +I  G+
Sbjct: 246 YIAWYDGIRRIGATRSGVFIALNPLTAVLLGALLLDERLTALMCVGGGVILVGI 299