Pairwise Alignments

Query, 202 a.a., membrane protein from Agrobacterium fabrum C58

Subject, 193 a.a., SCO family protein from Vibrio cholerae E7946 ATCC 55056

 Score = 75.9 bits (185), Expect = 5e-19
 Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 11/183 (6%)

Query: 9   WAVVVVLAGVVSWLTIEMTKTREEMVETAYGVPFALTAQNGQPIT--EKAFQGKPTALFF 66
           W++++V+A  + + +I+     ++ +      P  L+  N Q +   ++A   +   ++F
Sbjct: 5   WSLILVVAFTLGF-SIKAYLDSQQKLAAQVTTPLTLSGDNQQAVAIFDQA-DPRIRIVYF 62

Query: 67  GFTHCPEVCPTTLFELNGWMEKV-DPAGDKLQAYFVSVDPERDTPEIMQQYVSNVSKRIT 125
           GFT CP+VCPT+L  L+  + +V D    +L+  F+S+DPERD  ++  QY       I 
Sbjct: 63  GFTRCPDVCPTSLAMLSAALNQVDDKTKAQLRPMFISLDPERDDAKLAAQYAHYFHPMIE 122

Query: 126 GITGPADKIAETLKGYRIYAKKVPVDEKDPNGD--YTMDHTASVILLDANGRFAGTIAYG 183
           G++G      +  + Y +  +K  +    PN +  YT+DH++    L  +G     + + 
Sbjct: 123 GLSGSVATTNQIAQKYGVIFRKTEL----PNSELKYTLDHSSYFYFLQPDGTLINKVPHT 178

Query: 184 ENP 186
           ++P
Sbjct: 179 QDP 181