Pairwise Alignments

Query, 240 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 12/176 (6%)

Query: 6   FREGLKSGFPIALSAAPFGALFGAVAVDNGLSITEATIMSGTVYAGASQLVGIELFGQKV 65
           F +G  +  P++++  P+G L G+ A++ GLS+ E+  +S  +YAGA+QLV I +F    
Sbjct: 18  FWQGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIGMFKTGA 77

Query: 66  APWLIVLSVFAVNFRHILYSAAIARMISNWSLLQKAAGFFVLVDPQF----AESVRKYEN 121
               ++++ F +  RH LYS ++   IS   L  +    F+L D  F    A+S +++  
Sbjct: 78  GLLSLLIATFFITSRHFLYSVSMRSKISPLPLRWRLTLGFLLTDELFAICGAQSDKQFNR 137

Query: 122 TGTVGFSWY-MGFATPVYVLWLAMTILGASLGNLVGDPKAIGLDVLLPIYFMGMVL 176
                  WY +G     Y++W   +++G   G+ + D    GL+  +   F+ +V+
Sbjct: 138 -------WYALGAGLSFYLIWNLASLVGIVAGSYLPDLNQWGLEFAVAATFIAIVI 186