Pairwise Alignments

Query, 383 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 91.3 bits (225), Expect = 4e-23
 Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 10/297 (3%)

Query: 84  LNAIGNGQAIQSVVVMPQVSGTLSEIRAAAGARVVKGQVLARLDDEEQVIERDKAQVALR 143
           + AIG  +  Q V +  + +G + +I   +G +V K Q L  LD   +       +  L 
Sbjct: 58  IEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLP 117

Query: 144 SAIEKSSSYKNL---KSFSRLDVMDAQIAEEAAKLALSTAELNLKRRDIVAPIEGVAGIV 200
           +A  K   YK L    S S+    +A+ +  A    + + +  + RR+I AP  GV GI 
Sbjct: 118 AAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIR 177

Query: 201 AANVGDNVTTQSTIVSIDDRSEILVNFWAPERFATAIKVGMPVEATSISRPGETFTGEIE 260
              +G  +   + IV ++D S + + F  P+R  + I +   V+    + P  +F G I 
Sbjct: 178 NVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSIS 237

Query: 261 AVDNRVDEASRTIRIRAKFGNEKDELRAGMSFGVTMRFAG-ETYASVDPLAVQWDAEGSY 319
           A++  V   S  I+++A   N   +LR+GM     +     E   ++   A+ +   G  
Sbjct: 238 AIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDN 297

Query: 320 VWRVTDNKSNKVRVQ-----IVQRNPDAVLVKAELAEGEPVVIEGLQRVREGGAVRV 371
           V+ V++    K RVQ     + +R+     +   +  G+ VV  G  R+  G  VR+
Sbjct: 298 VYIVSEENGEK-RVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRI 353