Pairwise Alignments

Query, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  665 bits (1717), Expect = 0.0
 Identities = 373/1032 (36%), Positives = 596/1032 (57%), Gaps = 18/1032 (1%)

Query: 19   VRRPILAAVLNTLLVVAGLAALVGVEVRELPDVDRPSISVRTTYEGAAPETIDQEVTQTI 78
            V+RP+ A VL+ LL V G+ +   + VRE+PD++ P +SV T Y+GA+   I+ ++T  +
Sbjct: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67

Query: 79   EGAVARVSGIKSIASSSQFGTSRVTMEFSDNVDMAVAANDVRDAIGRVTNQLPDDADEPQ 138
            E  +A +SGI  I S S+ G SR+T+ F    D+    +D+RDA+ R    LP++AD+PQ
Sbjct: 68   EDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDPQ 127

Query: 139  IIKADSDSQPIMRLAVTSSTLSMEDLTKLVDDEIIDRLAAVDGVADVELYGDQEKVFRVD 198
            + K +   Q  + + ++SS +    LT  ++  ++DR + + GV+ V++ G   KV  V 
Sbjct: 128  VFKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVMYVR 187

Query: 199  LNQAALASRGLTVTDVSNALASAALDVPAGSLKSTTQDIVVRATASLTKPEDFSNLLIK- 257
            +    +A RG+  +D+S+AL    L+ P G +++ +  + VR        EDF  L++K 
Sbjct: 188  IKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLVVKR 247

Query: 258  ----DNIRLRDVATVMLGADDQSTSLRSNGVQGVGLGVIRQAQSNTLNISTGVKAAVDAM 313
                  I L+DVA V +GA++++++ +S+G+  V +G++ Q+ +N L ++  V   VD +
Sbjct: 248  ASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEVDKV 307

Query: 314  SANLPEGTRIVVTSDDAVFIEGALHEVELALGLSALIVVVVLYLFFRDWRATLIPAITMP 373
               LP+GTR+ +  D  VFIE ++ EV   L ++  +V++VLY+F    RATLIPA+T+P
Sbjct: 308  QQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAVTVP 367

Query: 374  VALIGTIVAIYMVGFSVNILTLLAIVLATGLVVDDAIVVLENIVRRRAEGMGPRAAAVLG 433
            V+LI   +A Y  GFS+N++TL+A++L+ GLVVDDAIVV+ENI      G  P  AA  G
Sbjct: 368  VSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLLAAYKG 427

Query: 434  TQEVFFAVIATTATLAAVFIPLSFLPGQLGGLFREFGFVLAFAVGLSSITALTLCPMLAS 493
            T+EV FAVIATT  L  VF+P+SF+ G +G LF EF  +LA AV  SS+ ALTL P+L S
Sbjct: 428  TREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLTPVLGS 487

Query: 494  RMLKQGLKEPTGPLMWFGNVFA---STYKTTLAACLNNPLIVIVVALIFSGLSWIAFGMI 550
            ++LK  +K P         +FA   S Y+  ++  +       VV     G S+    ++
Sbjct: 488  KLLKANVK-PGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSYGLMQLV 546

Query: 551  QNELTPREDRASVMMRVTAPQGVSLEYTRDQLQRIEENLQPLRDSGEIRNVYSIT----G 606
              +LTP EDR  +   V      S       +  +E+ L PL   G +++ +SI     G
Sbjct: 547  PAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKS-FSIQSPAFG 605

Query: 607  MNGSSNTGFMVLTLAPWADRERTQNQIAADVTSAANKVPALRGNAMQPNSLRIRGAGNG- 665
             N    TGF+++ L  W DR  T  +  + V  A   +P +R     P     RG  N  
Sbjct: 606  GNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDVRVFPFMPG---FRGGSNEP 662

Query: 666  LQMAMVGSNYPALTEATQKLLLSMEEGGLFDTPRLDNEPNQAQLSVSIDRERASDLGIDI 725
            +Q  + GS+Y  L    +KL    E+        +D      +L V+ID++RA++LGI +
Sbjct: 663  VQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAELGISV 722

Query: 726  TGLSRSMQSLLEGRSIVDVFVDGDAIPVRLLSSTRPINDPTDLENVFLKTGDGKIVPMSV 785
              +S +++ +L G+ +      G+   V L       N+  DL  ++++T  G++V +  
Sbjct: 723  KSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGELVTLDT 782

Query: 786  IATLKENAVAPQLNREQQLPSVGFTANLKDGVSLGQAMEKVNELAQSVMPSGARLLPLGE 845
            +  + E A A +L    +  SV  TANL+ G +LGQA++ +++ AQ ++P+   +   GE
Sbjct: 783  VTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISVSYSGE 842

Query: 846  AATLEENSSGMLLTFGFAIAIIFLVLAAQFESVLSSVIIMSTVPLGLACAVIALLVTGSS 905
            +   +EN S + + F  A+ + +LVLAAQFES ++ +++M TVP+G+    + L V G  
Sbjct: 843  SKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLFVMGQG 902

Query: 906  LNVYSQIGLVLLVGVMAKNGILIVEFANHLRDQGATVREAIEKATSIRLRPVMMTMIATI 965
            +N+YSQIG+++L+G++ KNGILIVEFAN LRD+G    +AI  A++ RLRP++MT   T+
Sbjct: 903  MNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMTAFTTL 962

Query: 966  LGGVPLVLAQGAGAEARIALGWVIVGGLGFATLVTLYITPVSYLLIARFAKPQADEEIRL 1025
             G +PL+++ GAG E+RIA+G VI  G+GFATLVTL + P  Y LI+   +     E  L
Sbjct: 963  AGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGSTQAPGHVEAEL 1022

Query: 1026 HRELELAARRKA 1037
            + EL+   + +A
Sbjct: 1023 NHELQQDVKGRA 1034