Pairwise Alignments

Query, 264 a.a., thymidylate synthase from Agrobacterium fabrum C58

Subject, 283 a.a., thymidylate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (359), Expect = 6e-39
 Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 19/283 (6%)

Query: 1   MKQYLDLLRHVMETGS-DRGDRTGTGTRSVFGYQMRFDLSEG-FPVLTTKKLHLRSIIHE 58
           M+QYLDL + +++ G     +RTG    +V    + +D+    FP++TT+K   ++ + E
Sbjct: 1   MRQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAE 60

Query: 59  LLWFLNGDTNIAYLKENGVSIWDEWADEN------------GDLGPVYGAQWRSWPAPDG 106
           LL ++ G  N A  ++ G   WD  A+ N             D+G VYG Q R+W  PDG
Sbjct: 61  LLGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKPDG 120

Query: 107 RHIDQIALLIEALKTNPNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQR 166
            HIDQ+  +++ L    + R  I++ +NP       L PC     F +    L     QR
Sbjct: 121 GHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQR 180

Query: 167 SADIFLGVPFNIASYALLTLMVAQVVGLKPGDFVHTLGDAHIYANHFE-QAQLQMTRTPK 225
           S D+ LG+ FN+    +   ++AQ+ G KPG   H + +AHIY +  E    +Q+ R P 
Sbjct: 181 SCDVPLGLNFNMVQVYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPF 240

Query: 226 ALPTMRLNPDVKNLFGFK----FEDFTLENYEADSSIKAPIAV 264
             P   +NP +K L   +     +DF +  Y+    I+ P +V
Sbjct: 241 PAPQFHINPKIKTLQDLETWVTLDDFDVTGYQFHDPIQYPFSV 283