Pairwise Alignments

Query, 514 a.a., htrA family protein from Agrobacterium fabrum C58

Subject, 472 a.a., trypsin-like serine protease with C-terminal PDZ domain from Dechlorosoma suillum PS

 Score =  210 bits (535), Expect = 8e-59
 Identities = 115/271 (42%), Positives = 172/271 (63%), Gaps = 6/271 (2%)

Query: 103 GSGFVIDPAGYVVTNNHVIEGADAIEVIFPNGSKLKATLVGTDTKTDLSVLKVE-PKTPL 161
           GSGFV D  G+++TN HV+  A  I VI PNG +++A +VG+D  TD++VLK   P  P 
Sbjct: 92  GSGFVFDAQGHLLTNAHVVRRARQILVIAPNGQEVEAKVVGSDDTTDIAVLKTTAPLAP- 150

Query: 162 KAVKFGDSRSMRIGDWVMAVGNPFGLGGSLTVGVISARGRNINAGPYDNFIQTDAAINKG 221
             V  G S+ +R GD V AVG+PFGL  S++ G++SA GR + + P+  F+QTDAAIN G
Sbjct: 151 -PVPLGSSKELRPGDPVFAVGSPFGLAHSVSAGIVSASGRFLPSNPHVAFLQTDAAINPG 209

Query: 222 NSGGPLFNMKGEVIGINTAIISPSGGSIGIGFAVPTELAQNIVQQLIEFGETRRGWLGVR 281
           NSGGPLF+ +G ++GIN+   S SGG   IGFA+P E A+ +   LI  G+ +RGWLG  
Sbjct: 210 NSGGPLFDAEGRLVGINSMSFSRSGGYTNIGFAIPVEEARRVAAILIRDGQVKRGWLGAE 269

Query: 282 VQPVTDDVAASLGMDSAKGALISGVAKGGPVENGPIQAGDVVLKFDGKDINEMRDLLRIV 341
           +Q  T+  A +LG    +G L++ V    P E   +QAGD+V+   G+ + +  DL R +
Sbjct: 270 LQ-ATETAARALGRQ--RGVLVTRVHADTPAEKAGLQAGDLVIGIAGRPLADGGDLHRFL 326

Query: 342 AESPVGKEVDVVVYRDGKEETVKVKLGQLQD 372
           A +  G  +++ ++R  +  +V+V LG+ ++
Sbjct: 327 AAAAPGDRLELELWRQQQSCSVRVVLGEKRE 357



 Score = 31.6 bits (70), Expect = 7e-05
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 427 LSNELRTEKGIAESV---EGVLVASVDPGSPAEQKGMKAGDVIVEVGQDFMEVPGDV 480
           L  EL+  +  A ++    GVLV  V   +PAE+ G++AGD+++ +    +   GD+
Sbjct: 266 LGAELQATETAARALGRQRGVLVTRVHADTPAEKAGLQAGDLVIGIAGRPLADGGDL 322



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 288 DVAASLGMD----SAKGALISGVAKGGPVENGPIQAGDVVLKFDGKDINEMRDL 337
           D A SLG+      AKG L     +G   +NG +  GD +   DG+ + E+ DL
Sbjct: 369 DPARSLGLVLQELPAKGGLRILAVQGIAEQNG-LDPGDEIDSLDGQPVKEIHDL 421