Pairwise Alignments

Query, 251 a.a., pyridoxal phosphate biosynthesis protein from Agrobacterium fabrum C58

Subject, 237 a.a., pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  196 bits (499), Expect = 3e-55
 Identities = 109/239 (45%), Positives = 147/239 (61%), Gaps = 9/239 (3%)

Query: 4   KLSVNLNAIAMLRNRRDLPWPDVAHFGQIALSAGASGLTVHPRPDQRHIRFSDLPVLRAL 63
           KLSVN+N +A LRN R    P+V        + GA G+TVHPRPD+RHIR +D+  LR L
Sbjct: 3   KLSVNINKVATLRNARGGDTPNVVKVALDCEAFGADGITVHPRPDERHIRRADVYDLRPL 62

Query: 64  IDDRFPGAEFNIEGYPTEDFLVLCEKTQPEQVTLVPDDPSQATSDHGWDFRKHAVFLKDV 123
           +       EFNIEGYP+ +F+ L  K +P QVTLVPDDPSQ TS+ GWD + +  FL +V
Sbjct: 63  LR-----TEFNIEGYPSPEFIDLVLKVKPHQVTLVPDDPSQITSNSGWDTKANLEFLSEV 117

Query: 124 VGRLKAGGMRVSLFADGDGEREPVELAAETGAARIELYTGPYGGCFDDTQKADLLVEKLG 183
           + +  + G+R S+F   D E   VE AA+ GA R+ELYT PY   +    +A   V    
Sbjct: 118 LDQFNSAGIRTSVFVAADPEM--VEYAAKAGADRVELYTEPYATAYPKNPEA--AVAPFV 173

Query: 184 QTADHAAALGLAVNAGHDLTVANLPKLMKRIPNLAEVSIGHGLTADAMEYGMAETVRRF 242
           + A  A  LG+ +NAGHDL++ NL    K IP + EVSIGH L +DA+  G+  T++ +
Sbjct: 174 EAAKTARKLGIGLNAGHDLSLVNLNYFYKNIPWVDEVSIGHALISDALYLGLERTIQEY 232