Pairwise Alignments

Query, 564 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 616 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  159 bits (401), Expect = 4e-43
 Identities = 139/518 (26%), Positives = 236/518 (45%), Gaps = 32/518 (6%)

Query: 57  WDAAQNTLSTSFFGMLISLAIGGAFALSLTLCDIRGKSILSFLFMLPMMIPPQVTALSWI 116
           W    NTLS +   + +SL +G   A  ++  D+ G+   +   ++P M+P    AL+W 
Sbjct: 101 WRPLFNTLSVAVGAISLSLLVGTVLAWLISRTDMFGRRWFATALIVPYMLPAWTFALAWT 160

Query: 117 GM-----TGPSSTLLKAIGLAPAMGSPQPL-YSIAGIALLLGVQHAPLVYLSLRAGLLAL 170
            +      G     L+A GL P    P  L Y    I ++L + + P V L   + L   
Sbjct: 161 TLFKNRTVGGQPGWLEATGLTP----PDWLAYGQFPITIILALHYTPFVILLFGSALRRF 216

Query: 171 PQDGIEAAKLSGASPRRVLFDIILPLSTPGLIAGAAISFVSNVGNFGIPAILGIPGSIFT 230
                ++A++ GA   +V   IILPL  P L++   + F   +G FG+P +LG+P     
Sbjct: 217 DSQLEDSARILGAKRHQVALQIILPLMRPALLSSMVLIFAKCLGEFGVPYVLGLPVKFEV 276

Query: 231 LPTLIYSRFASFGTSTFGDIAILSTMIAIISVAGLALQERAMK-GRDYRIIGLSGKA-AT 288
           L T ++   AS  T   G   +++  I +I +  L +  R ++  R +  IG  G     
Sbjct: 277 LSTSLFRSIASRQTGVAG---VIAGSIMLIGIITLWIDARLVREARRFVTIGSKGSMNRQ 333

Query: 289 FGLGRWRVPAELALWLVLLFMLVAPLTALVASSL--APA----------YGVPLSLKTAT 336
             LGR R+PA      V L  +  PL  L+ S++   PA          Y +   L T  
Sbjct: 334 SRLGRMRLPAAGFAATVFLLSVGLPLLTLLLSTVMKMPARFTLDNFTLDYWIGRDLDTIA 393

Query: 337 LHAYEELLYRQSVTRTAFRNSLFLATATSLCLLAVTVLTAYFLVRGKSRFMFL-LSALVD 395
           L   +  +   S   TA RN+L +    S+    + +L  Y ++R   R + + L  +  
Sbjct: 394 L---KTGILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRTPVRLLSVYLRQVTF 450

Query: 396 IPYALPGVVISVSFVLLFAAPIPLLGVTLYGTIWIILLAYFSSFFAVSLKPMVSAFLQFD 455
           +PY +PG+  + +++ LFA P   L   LYGT+ I++LA  +     + +  +SA  Q  
Sbjct: 451 LPYLVPGIAFAAAYLSLFAVPRGPL-PALYGTVVILVLALIADQMPYASRAGISAMTQLG 509

Query: 456 PSLEEAARLSGAGFWRRLKDIILPLVGPAAGASVILVFLIACNELTVSALLWSAGTQTLG 515
              EEAA+++GAG+ RR+  I++P+   +    V+L F+     L++  +L    T  L 
Sbjct: 510 KDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLSLFVILAVPSTDVLT 569

Query: 516 VLIYNLDDSGSFDLASALSVLVVIMVIILMLLLEILGR 553
                L D      A+A+ +++  +     L+ + L R
Sbjct: 570 TYSLRLVDYHYTQAANAVVLIIAAIAYCGTLIAQKLTR 607



 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 24/219 (10%)

Query: 50  LLADPALWDAAQNTLSTSFFGMLISLAIGGAFALSLTLCDIRGKSI-LSFLFMLPMMIPP 108
           +L    LW AA+NTL+      + S  +G      +    +R  S+ L  +  LP ++P 
Sbjct: 398 ILLSSDLWTAARNTLTIVGIASVTSGILGLLVGYVVIRTPVRLLSVYLRQVTFLPYLVPG 457

Query: 109 QVTALSWIGMTGPSSTLLKAIGLAPAMGSPQPLYSIAGIALLLGVQHAPLVYLSLRAGLL 168
              A +++ +             A   G    LY    + L+L +    + Y S RAG+ 
Sbjct: 458 IAFAAAYLSL------------FAVPRGPLPALYGTV-VILVLALIADQMPYAS-RAGIS 503

Query: 169 ALPQ---DGIEAAKLSGASPRRVLFDIILPLSTPGLIAGAAISFVSNVGNFGIPAILGIP 225
           A+ Q   D  EAA+++GA   R +  I++P+    L+ G  + F+S +    +  IL +P
Sbjct: 504 AMTQLGKDPEEAAQVAGAGWLRRMISIVIPIQKGSLVTGVLLPFISGIKGLSLFVILAVP 563

Query: 226 GS-IFTLPTL-----IYSRFASFGTSTFGDIAILSTMIA 258
            + + T  +L      Y++ A+        IA   T+IA
Sbjct: 564 STDVLTTYSLRLVDYHYTQAANAVVLIIAAIAYCGTLIA 602